DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ALTSS
Uniprot ID:
O60343
Source protein:
TBC1 domain family member 4
Source gene:
TBC1D4
Class:
DEG_SPOP_SBC_1
Location:
288:292
E3 ligase:
SPOP
DEGRON score:
0.9872
ASA_SCORE:
68.74
COIL:
0.8072
CONS_SCORE:
0.2944
DSS_SCORE:
0.4268
HELIX:
0.1446
FCONS_SCORE:
0.9969
RIG_SCORE:
0.7031
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G283A
TCGA-78-7220
LUAD
TCGA
ALTSS
DEG_SPOP_SBC_1
0.1944
p.G283A
DO24409
LUAD
ICGC
ALTSS
DEG_SPOP_SBC_1
0.1944
p.R299Q
TCGA-AG-3902
READ
TCGA
ALTSS
DEG_SPOP_SBC_1
0.1389
p.R299Q
DO36407
READ
ICGC
ALTSS
DEG_SPOP_SBC_1
0.1389
p.R299Q
SIDM01608
Endometrial Carcinoma
GDSC
ALTSS
DEG_SPOP_SBC_1
0.1389
p.R299Q
ACH-000990
Endometrial/Uterine Cancer
CCLE
ALTSS
DEG_SPOP_SBC_1
0.1389
p.G283W
TCGA-B5-A0JY
UCEC
TCGA
ALTSS
DEG_SPOP_SBC_1
0.1944
p.E278K
DO3346
BRCA
ICGC
ALTSS
DEG_SPOP_SBC_1
0.0556
p.L285R
DO233129
GACA
ICGC
ALTSS
DEG_SPOP_SBC_1
0.6944
p.T290N
DO229024
LICA
ICGC
ALTSS
DEG_SPOP_SBC_1
0.7055
p.I280M
DO231636
LINC
ICGC
ALTSS
DEG_SPOP_SBC_1
0.1111
p.E297K
DO222880
MELA
ICGC
ALTSS
DEG_SPOP_SBC_1
0.1944
p.A288S
DO27939
ORCA
ICGC
ALTSS
DEG_SPOP_SBC_1
0.7588
p.M296I
DO43065
UCEC
ICGC
ALTSS
DEG_SPOP_SBC_1
0.2222
p.C298Y
DO43747
UCEC
ICGC
ALTSS
DEG_SPOP_SBC_1
0.1667
p.G279C
SIDM00338
Acute Myeloid Leukemia
GDSC
ALTSS
DEG_SPOP_SBC_1
0.0833
p.G279C
ACH-000439
Leukemia
CCLE
ALTSS
DEG_SPOP_SBC_1
0.0833
p.G279C
ME-1
haematopoietic_and_lymphoid_tissue
COSMIC
ALTSS
DEG_SPOP_SBC_1
0.0833
p.R299W
ACH-001735
Leukemia
CCLE
ALTSS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with TBC1D4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60343
TBC1 domain family member 4
DEG_SPOP_SBC_1
288:292
ALTSS
SPOP
0.9872
More...
P40305
Interferon alpha-inducible protein 27, mitochondrial
DEG_SPOP_SBC_1
5:9
ALTSS
SPOP
0.8417
More...
P49736
DNA replication licensing factor MCM2
DEG_SPOP_SBC_1
37:41
ALTSS
SPOP
0.9991
More...
Q5JS13
Ras-specific guanine nucleotide-releasing factor RalGPS1
DEG_SPOP_SBC_1
385:389
ALTSS
SPOP
0.7353
More...
Q68DK2
Zinc finger FYVE domain-containing protein 26
DEG_SPOP_SBC_1
1299:1303
ALTSS
SPOP
0.9456
More...
Q7Z3B3
KAT8 regulatory NSL complex subunit 1
DEG_SPOP_SBC_1
182:186
ALTSS
SPOP
0.8556
More...
Q96P56
Cation channel sperm-associated protein 2
DEG_SPOP_SBC_1
382:386
ALTSS
SPOP
0.8748
More...
Q9NZ09
Ubiquitin-associated protein 1
DEG_SPOP_SBC_1
334:338
ALTSS
SPOP
0.9693
More...
Q6TFL3
Coiled-coil domain-containing protein 171
DEG_SPOP_SBC_1
1303:1307
ALTSS
SPOP
0.6534
More...