DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ALTSS
Uniprot ID:
Q6TFL3
Source protein:
Coiled-coil domain-containing protein 171
Source gene:
CCDC171
Class:
DEG_SPOP_SBC_1
Location:
1303:1307
E3 ligase:
SPOP
DEGRON score:
0.6534
ASA_SCORE:
82.92
COIL:
0.866
CONS_SCORE:
0.2223
DSS_SCORE:
0.3726
HELIX:
0.0894
FCONS_SCORE:
0.9396
RIG_SCORE:
0.6933
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1315P
TCGA-AX-A06F
UCEC
TCGA
ALTSS
DEG_SPOP_SBC_1
0.5556
p.S1315P
DO41752
UCEC
ICGC
ALTSS
DEG_SPOP_SBC_1
0.5556
p.T1295I
DO233764
GACA
ICGC
ALTSS
DEG_SPOP_SBC_1
0.1111
p.A1316G
DO50861
LICA
ICGC
ALTSS
DEG_SPOP_SBC_1
0.0833
p.S1310A
SIDM01199
Hepatocellular Carcinoma
GDSC
ALTSS
DEG_SPOP_SBC_1
0.25
p.S1310A
ACH-000493
Liver Cancer
CCLE
ALTSS
DEG_SPOP_SBC_1
0.25
p.S1310A
SNU-423
liver
COSMIC
ALTSS
DEG_SPOP_SBC_1
0.25
p.S1310F
SIDM01135
Pancreatic Carcinoma
GDSC
ALTSS
DEG_SPOP_SBC_1
0.25
p.S1310F
ACH-000060
Pancreatic Cancer
CCLE
ALTSS
DEG_SPOP_SBC_1
0.25
p.S1310F
PANC-10-05
pancreas
COSMIC
ALTSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with CCDC171 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60343
TBC1 domain family member 4
DEG_SPOP_SBC_1
288:292
ALTSS
SPOP
0.9872
More...
P40305
Interferon alpha-inducible protein 27, mitochondrial
DEG_SPOP_SBC_1
5:9
ALTSS
SPOP
0.8417
More...
P49736
DNA replication licensing factor MCM2
DEG_SPOP_SBC_1
37:41
ALTSS
SPOP
0.9991
More...
Q5JS13
Ras-specific guanine nucleotide-releasing factor RalGPS1
DEG_SPOP_SBC_1
385:389
ALTSS
SPOP
0.7353
More...
Q68DK2
Zinc finger FYVE domain-containing protein 26
DEG_SPOP_SBC_1
1299:1303
ALTSS
SPOP
0.9456
More...
Q7Z3B3
KAT8 regulatory NSL complex subunit 1
DEG_SPOP_SBC_1
182:186
ALTSS
SPOP
0.8556
More...
Q96P56
Cation channel sperm-associated protein 2
DEG_SPOP_SBC_1
382:386
ALTSS
SPOP
0.8748
More...
Q9NZ09
Ubiquitin-associated protein 1
DEG_SPOP_SBC_1
334:338
ALTSS
SPOP
0.9693
More...
Q6TFL3
Coiled-coil domain-containing protein 171
DEG_SPOP_SBC_1
1303:1307
ALTSS
SPOP
0.6534
More...