DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AMSSS
Uniprot ID:
P19532
Source protein:
Transcription factor E3
Source gene:
TFE3
Class:
DEG_SPOP_SBC_1
Location:
105:109
E3 ligase:
SPOP
DEGRON score:
0.8575
ASA_SCORE:
83.7
COIL:
0.8474
CONS_SCORE:
0.6195
DSS_SCORE:
0.6459
HELIX:
0.1278
FCONS_SCORE:
0.9538
RIG_SCORE:
0.5498
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G100C
TCGA-58-8388
LUSC
TCGA
AMSSS
DEG_SPOP_SBC_1
0.1944
p.S111L
TCGA-EB-A431
SKCM
TCGA
AMSSS
DEG_SPOP_SBC_1
0.2778
p.S111L
DO37671
SKCM
ICGC
AMSSS
DEG_SPOP_SBC_1
0.2778
p.M106R
TCGA-EE-A2MS
SKCM
TCGA
AMSSS
DEG_SPOP_SBC_1
0.7521
p.M106R
DO37567
SKCM
ICGC
AMSSS
DEG_SPOP_SBC_1
0.7521
p.S107L
TCGA-FI-A2D5
UCEC
TCGA
AMSSS
DEG_SPOP_SBC_1
0.7667
p.S107L
DO41331
UCEC
ICGC
AMSSS
DEG_SPOP_SBC_1
0.7667
p.V114D
DO231495
THCA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with TFE3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AMSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12034
Fibroblast growth factor 5
DEG_SPOP_SBC_1
53:57
AMSSS
SPOP
0.9021
More...
P19532
Transcription factor E3
DEG_SPOP_SBC_1
105:109
AMSSS
SPOP
0.8575
More...
P25054
Adenomatous polyposis coli protein
DEG_SPOP_SBC_1
336:340
AMSSS
SPOP
0.9067
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_SPOP_SBC_1
612:616
AMSSS
SPOP
0.9968
More...
Q68CP9
AT-rich interactive domain-containing protein 2
DEG_SPOP_SBC_1
987:991
AMSSS
SPOP
0.8843
More...
Q8IVL0
Neuron navigator 3
DEG_SPOP_SBC_1
1466:1470
AMSSS
SPOP
0.9941
More...
Q8N556
Actin filament-associated protein 1
DEG_SPOP_SBC_1
117:121
AMSSS
SPOP
0.9445
More...
Q8TED9
Actin filament-associated protein 1-like 1
DEG_SPOP_SBC_1
184:188
AMSSS
SPOP
0.9977
More...
Q96MP8
BTB/POZ domain-containing protein KCTD7
DEG_SPOP_SBC_1
17:21
AMSSS
SPOP
0.8897
More...