DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AMSSS
Uniprot ID:
Q5T6F2
Source protein:
Ubiquitin-associated protein 2
Source gene:
UBAP2
Class:
DEG_SPOP_SBC_1
Location:
612:616
E3 ligase:
SPOP
DEGRON score:
0.9968
ASA_SCORE:
85.66
COIL:
0.9358
CONS_SCORE:
0.4547
DSS_SCORE:
0.4423
HELIX:
0.0416
FCONS_SCORE:
0.9743
RIG_SCORE:
0.655
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D618H
TCGA-A7-A13F
BRCA
TCGA
AMSSS
DEG_SPOP_SBC_1
0.2778
p.D618H
DO4098
BRCA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.2778
p.H623N
TCGA-CZ-5459
KIRC
TCGA
AMSSS
DEG_SPOP_SBC_1
0.1389
p.H623N
DO17452
KIRC
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1389
p.M613V
TCGA-DK-A3IK
BLCA
TCGA
AMSSS
DEG_SPOP_SBC_1
0.6097
p.M613V
DO454
BLCA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.6097
p.R625G
TCGA-MP-A4T4
LUAD
TCGA
AMSSS
DEG_SPOP_SBC_1
0.0833
p.R625G
DO45357
LUAD
ICGC
AMSSS
DEG_SPOP_SBC_1
0.0833
p.N606S
DO229010
COCA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1667
p.N606S
DO229005
COCA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1667
p.N606S
DO229505
LAML
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1667
p.N606S
DO230993
LUSC
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1667
p.N606S
DO231007
LUSC
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1667
p.P610T
DO229027
LICA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.2778
p.N624K
DO229041
LICA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1111
p.S614T
DO50886
LICA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.6005
p.S621T
SIDM00524
Small Cell Lung Carcinoma
GDSC
AMSSS
DEG_SPOP_SBC_1
0.1944
p.S621T
ACH-000703
Lung Cancer
CCLE
AMSSS
DEG_SPOP_SBC_1
0.1944
p.S621T
DMS-79
lung
COSMIC
AMSSS
DEG_SPOP_SBC_1
0.1944
p.R625K
SIDM00572
Gastric Carcinoma
GDSC
AMSSS
DEG_SPOP_SBC_1
0.0833
p.R625K
SIDM01040
Ovarian Carcinoma
GDSC
AMSSS
DEG_SPOP_SBC_1
0.0833
p.R625K
SIDM00192
Colorectal Carcinoma
GDSC
AMSSS
DEG_SPOP_SBC_1
0.0833
p.S602R
SIDM01588
Endometrial Carcinoma
GDSC
AMSSS
DEG_SPOP_SBC_1
0.0556
p.S602R
ACH-000993
Endometrial/Uterine Cancer
CCLE
AMSSS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with UBAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AMSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12034
Fibroblast growth factor 5
DEG_SPOP_SBC_1
53:57
AMSSS
SPOP
0.9021
More...
P19532
Transcription factor E3
DEG_SPOP_SBC_1
105:109
AMSSS
SPOP
0.8575
More...
P25054
Adenomatous polyposis coli protein
DEG_SPOP_SBC_1
336:340
AMSSS
SPOP
0.9067
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_SPOP_SBC_1
612:616
AMSSS
SPOP
0.9968
More...
Q68CP9
AT-rich interactive domain-containing protein 2
DEG_SPOP_SBC_1
987:991
AMSSS
SPOP
0.8843
More...
Q8IVL0
Neuron navigator 3
DEG_SPOP_SBC_1
1466:1470
AMSSS
SPOP
0.9941
More...
Q8N556
Actin filament-associated protein 1
DEG_SPOP_SBC_1
117:121
AMSSS
SPOP
0.9445
More...
Q8TED9
Actin filament-associated protein 1-like 1
DEG_SPOP_SBC_1
184:188
AMSSS
SPOP
0.9977
More...
Q96MP8
BTB/POZ domain-containing protein KCTD7
DEG_SPOP_SBC_1
17:21
AMSSS
SPOP
0.8897
More...