DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AMSSS
Uniprot ID:
Q8IVL0
Source protein:
Neuron navigator 3
Source gene:
NAV3
Class:
DEG_SPOP_SBC_1
Location:
1466:1470
E3 ligase:
SPOP
DEGRON score:
0.9941
ASA_SCORE:
67.74
COIL:
0.7786
CONS_SCORE:
0.352
DSS_SCORE:
0.4513
HELIX:
0.1252
FCONS_SCORE:
0.9705
RIG_SCORE:
0.6151
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1460T
TCGA-55-6985
LUAD
TCGA
AMSSS
DEG_SPOP_SBC_1
0.1667
p.P1460T
DO25659
LUAD
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1667
p.G1456R
TCGA-60-2714
LUSC
TCGA
AMSSS
DEG_SPOP_SBC_1
0.0556
p.G1456R
DO26530
LUSC
ICGC
AMSSS
DEG_SPOP_SBC_1
0.0556
p.G1456V
TCGA-60-2714
LUSC
TCGA
AMSSS
DEG_SPOP_SBC_1
0.0556
p.G1456V
DO234401
ESAD
ICGC
AMSSS
DEG_SPOP_SBC_1
0.0556
p.G1456V
DO26530
LUSC
ICGC
AMSSS
DEG_SPOP_SBC_1
0.0556
p.A1466D
TCGA-86-A4JF
LUAD
TCGA
AMSSS
DEG_SPOP_SBC_1
0.7793
p.A1466D
DO45317
LUAD
ICGC
AMSSS
DEG_SPOP_SBC_1
0.7793
p.A1472D
TCGA-95-7039
LUAD
TCGA
AMSSS
DEG_SPOP_SBC_1
0.2778
p.A1472D
DO23907
LUAD
ICGC
AMSSS
DEG_SPOP_SBC_1
0.2778
p.K1474I
TCGA-CA-6717
COAD
TCGA
AMSSS
DEG_SPOP_SBC_1
0.3333
p.K1474I
DO8264
COAD
ICGC
AMSSS
DEG_SPOP_SBC_1
0.3333
p.S1463F
TCGA-D3-A8GM
SKCM
TCGA
AMSSS
DEG_SPOP_SBC_1
0.6944
p.S1463F
DO50288
SKCM
ICGC
AMSSS
DEG_SPOP_SBC_1
0.6944
p.G1473R
TCGA-DD-AADG
LIHC
TCGA
AMSSS
DEG_SPOP_SBC_1
0.25
p.G1473R
DO219571
LIHC
ICGC
AMSSS
DEG_SPOP_SBC_1
0.25
p.S1468P
TCGA-FI-A2D5
UCEC
TCGA
AMSSS
DEG_SPOP_SBC_1
0.7863
p.S1468P
DO41331
UCEC
ICGC
AMSSS
DEG_SPOP_SBC_1
0.7863
p.P1464L
TCGA-R6-A8WG
ESCA
TCGA
AMSSS
DEG_SPOP_SBC_1
0.2778
p.S1465Y
DO233674
GACA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.75
p.S1478Y
DO52124
PAEN
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1111
p.G1473E
SIDM00118
Colorectal Carcinoma
GDSC
AMSSS
DEG_SPOP_SBC_1
0.25
p.G1473E
ACH-001081
Colon/Colorectal Cancer
CCLE
AMSSS
DEG_SPOP_SBC_1
0.25
p.G1473E
HCC2998
large_intestine
COSMIC
AMSSS
DEG_SPOP_SBC_1
0.25
p.S1459P
ACH-000937
Leukemia
CCLE
AMSSS
DEG_SPOP_SBC_1
0.5833
p.E1456V
NCI-H1092
lung
COSMIC
AMSSS
DEG_SPOP_SBC_1
0.0556
p.I1470M
PCI-30
upper_aerodigestive_tract
COSMIC
AMSSS
DEG_SPOP_SBC_1
0.7618
Drug responses associated with NAV3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AMSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12034
Fibroblast growth factor 5
DEG_SPOP_SBC_1
53:57
AMSSS
SPOP
0.9021
More...
P19532
Transcription factor E3
DEG_SPOP_SBC_1
105:109
AMSSS
SPOP
0.8575
More...
P25054
Adenomatous polyposis coli protein
DEG_SPOP_SBC_1
336:340
AMSSS
SPOP
0.9067
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_SPOP_SBC_1
612:616
AMSSS
SPOP
0.9968
More...
Q68CP9
AT-rich interactive domain-containing protein 2
DEG_SPOP_SBC_1
987:991
AMSSS
SPOP
0.8843
More...
Q8IVL0
Neuron navigator 3
DEG_SPOP_SBC_1
1466:1470
AMSSS
SPOP
0.9941
More...
Q8N556
Actin filament-associated protein 1
DEG_SPOP_SBC_1
117:121
AMSSS
SPOP
0.9445
More...
Q8TED9
Actin filament-associated protein 1-like 1
DEG_SPOP_SBC_1
184:188
AMSSS
SPOP
0.9977
More...
Q96MP8
BTB/POZ domain-containing protein KCTD7
DEG_SPOP_SBC_1
17:21
AMSSS
SPOP
0.8897
More...