DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AMSSS
Uniprot ID:
P25054
Source protein:
Adenomatous polyposis coli protein
Source gene:
APC
Class:
DEG_SPOP_SBC_1
Location:
336:340
E3 ligase:
SPOP
DEGRON score:
0.9067
ASA_SCORE:
46.98
COIL:
0.5024
CONS_SCORE:
0.5195
DSS_SCORE:
0.3289
HELIX:
0.498
FCONS_SCORE:
0.9853
RIG_SCORE:
0.7287
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D328Y
TCGA-2Z-A9JR
KIRP
TCGA
AMSSS
DEG_SPOP_SBC_1
0.1111
p.D328Y
DO219685
KIRP
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1111
p.S331P
TCGA-A5-A1OF
UCEC
TCGA
AMSSS
DEG_SPOP_SBC_1
0.6389
p.S331P
DO42568
UCEC
ICGC
AMSSS
DEG_SPOP_SBC_1
0.6389
p.R332Q
TCGA-EI-6917
READ
TCGA
AMSSS
DEG_SPOP_SBC_1
0.2222
p.R332Q
DO36881
READ
ICGC
AMSSS
DEG_SPOP_SBC_1
0.2222
p.Q341L
DO225037
BRCA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.3056
p.Q341L
DO227629
BRCA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.3056
p.D326Y
DO233904
GACA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.0556
p.D329Y
DO228985
LICA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1389
p.M347V
DO35242
PACA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1389
p.D328V
DO51495
PACA
ICGC
AMSSS
DEG_SPOP_SBC_1
0.1111
p.S331L
SIDM00534
Colorectal Carcinoma
GDSC
AMSSS
DEG_SPOP_SBC_1
0.6389
p.S331L
ACH-000986
Colon/Colorectal Cancer
CCLE
AMSSS
DEG_SPOP_SBC_1
0.6389
p.S331L
HT-115
large_intestine
COSMIC
AMSSS
DEG_SPOP_SBC_1
0.6389
Drug responses associated with APC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AMSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12034
Fibroblast growth factor 5
DEG_SPOP_SBC_1
53:57
AMSSS
SPOP
0.9021
More...
P19532
Transcription factor E3
DEG_SPOP_SBC_1
105:109
AMSSS
SPOP
0.8575
More...
P25054
Adenomatous polyposis coli protein
DEG_SPOP_SBC_1
336:340
AMSSS
SPOP
0.9067
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_SPOP_SBC_1
612:616
AMSSS
SPOP
0.9968
More...
Q68CP9
AT-rich interactive domain-containing protein 2
DEG_SPOP_SBC_1
987:991
AMSSS
SPOP
0.8843
More...
Q8IVL0
Neuron navigator 3
DEG_SPOP_SBC_1
1466:1470
AMSSS
SPOP
0.9941
More...
Q8N556
Actin filament-associated protein 1
DEG_SPOP_SBC_1
117:121
AMSSS
SPOP
0.9445
More...
Q8TED9
Actin filament-associated protein 1-like 1
DEG_SPOP_SBC_1
184:188
AMSSS
SPOP
0.9977
More...
Q96MP8
BTB/POZ domain-containing protein KCTD7
DEG_SPOP_SBC_1
17:21
AMSSS
SPOP
0.8897
More...