DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AVSTS
Uniprot ID:
P43146
Source protein:
Netrin receptor DCC
Source gene:
DCC
Class:
DEG_SPOP_SBC_1
Location:
536:540
E3 ligase:
SPOP
DEGRON score:
0.6288
ASA_SCORE:
46.18
COIL:
0.3296
CONS_SCORE:
0.5757
DSS_SCORE:
0.3848
HELIX:
0.0026
FCONS_SCORE:
0.9281
RIG_SCORE:
0.7301
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T542I
TCGA-58-A46N
LUSC
TCGA
AVSTS
DEG_SPOP_SBC_1
0.2778
p.T542I
DO45460
LUSC
ICGC
AVSTS
DEG_SPOP_SBC_1
0.2778
p.P528T
TCGA-A6-6653
COAD
TCGA
AVSTS
DEG_SPOP_SBC_1
0.1111
p.P528T
DO10373
COAD
ICGC
AVSTS
DEG_SPOP_SBC_1
0.1111
p.S538F
TCGA-AA-3947
COAD
TCGA
AVSTS
DEG_SPOP_SBC_1
0.7982
p.S538F
TCGA-DA-A1I5
SKCM
TCGA
AVSTS
DEG_SPOP_SBC_1
0.7982
p.S538F
DO8192
COAD
ICGC
AVSTS
DEG_SPOP_SBC_1
0.7982
p.S538F
DO37447
SKCM
ICGC
AVSTS
DEG_SPOP_SBC_1
0.7982
p.P530Q
TCGA-D3-A2JB
SKCM
TCGA
AVSTS
DEG_SPOP_SBC_1
0.1667
p.P530Q
DO47607
SKCM
ICGC
AVSTS
DEG_SPOP_SBC_1
0.1667
p.L545R
TCGA-EO-A22U
UCEC
TCGA
AVSTS
DEG_SPOP_SBC_1
0.1944
p.L545R
TCGA-VQ-A8PC
STAD
TCGA
AVSTS
DEG_SPOP_SBC_1
0.1944
p.L545R
DO234214
ESAD
ICGC
AVSTS
DEG_SPOP_SBC_1
0.1944
p.L545R
DO234449
ESAD
ICGC
AVSTS
DEG_SPOP_SBC_1
0.1944
p.L545R
DO51767
STAD
ICGC
AVSTS
DEG_SPOP_SBC_1
0.1944
p.L545R
DO43755
UCEC
ICGC
AVSTS
DEG_SPOP_SBC_1
0.1944
p.L545I
TCGA-EO-A3B0
UCEC
TCGA
AVSTS
DEG_SPOP_SBC_1
0.1944
p.L545I
DO219773
UCEC
ICGC
AVSTS
DEG_SPOP_SBC_1
0.1944
p.E532D
TCGA-FS-A1ZA
SKCM
TCGA
AVSTS
DEG_SPOP_SBC_1
0.2222
p.E532D
DO37551
SKCM
ICGC
AVSTS
DEG_SPOP_SBC_1
0.2222
p.E549K
TCGA-GF-A6C9
SKCM
TCGA
AVSTS
DEG_SPOP_SBC_1
0.0833
p.E549K
DO51254
SKCM
ICGC
AVSTS
DEG_SPOP_SBC_1
0.0833
p.E549K
SIDM01175
Other Sarcomas
GDSC
AVSTS
DEG_SPOP_SBC_1
0.0833
p.E549K
SW684
soft_tissue
COSMIC
AVSTS
DEG_SPOP_SBC_1
0.0833
p.E532K
TCGA-GV-A3JV
BLCA
TCGA
AVSTS
DEG_SPOP_SBC_1
0.2222
p.E532K
DO743
BLCA
ICGC
AVSTS
DEG_SPOP_SBC_1
0.2222
p.Q526H
TCGA-VR-A8EQ
ESCA
TCGA
AVSTS
DEG_SPOP_SBC_1
0.0556
p.S543L
DO219878
SKCA
ICGC
AVSTS
DEG_SPOP_SBC_1
0.25
p.Q535H
SIDM00845
Burkitt's Lymphoma
GDSC
AVSTS
DEG_SPOP_SBC_1
0.3056
p.Q535H
SIDM00461
Acute Myeloid Leukemia
GDSC
AVSTS
DEG_SPOP_SBC_1
0.3056
p.Q535H
SIDM00946
T-Lymphoblastic Leukemia
GDSC
AVSTS
DEG_SPOP_SBC_1
0.3056
p.Q535H
SIDM01519
Head and Neck Carcinoma
GDSC
AVSTS
DEG_SPOP_SBC_1
0.3056
p.Q535H
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
AVSTS
DEG_SPOP_SBC_1
0.3056
p.V527I
SIDM00486
Squamous Cell Lung Carcinoma
GDSC
AVSTS
DEG_SPOP_SBC_1
0.0833
p.V527I
EBC-1
lung
COSMIC
AVSTS
DEG_SPOP_SBC_1
0.0833
p.T539A
SIDM01588
Endometrial Carcinoma
GDSC
AVSTS
DEG_SPOP_SBC_1
0.7139
p.Y530C
ACH-000997
Colon/Colorectal Cancer
CCLE
AVSTS
DEG_SPOP_SBC_1
0.1667
p.Y530C
HCT-15
large_intestine
COSMIC
AVSTS
DEG_SPOP_SBC_1
0.1667
p.E526K
SW684
soft_tissue
COSMIC
AVSTS
DEG_SPOP_SBC_1
0.0556
p.A529D
NCI-H2141
lung
COSMIC
AVSTS
DEG_SPOP_SBC_1
0.1389
Drug responses associated with DCC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14776
Transcription elongation regulator 1
DEG_SPOP_SBC_1
269:273
AVSTS
SPOP
0.9767
More...
O95271
Poly [ADP-ribose] polymerase tankyrase-1
DEG_SPOP_SBC_1
107:111
AVSTS
SPOP
0.7984
More...
P35914
Hydroxymethylglutaryl-CoA lyase, mitochondrial
DEG_SPOP_SBC_1
20:24
AVSTS
SPOP
0.9441
More...
P43146
Netrin receptor DCC
DEG_SPOP_SBC_1
536:540
AVSTS
SPOP
0.6288
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
397:401
AVSTS
SPOP
0.9758
More...
Q9BQQ3
Golgi reassembly-stacking protein 1
DEG_SPOP_SBC_1
337:341
AVSTS
SPOP
0.9472
More...
Q9H2F9
Coiled-coil domain-containing protein 68
DEG_SPOP_SBC_1
313:317
AVSTS
SPOP
0.9865
More...
Q9HCE6
Rho guanine nucleotide exchange factor 10-like protein
DEG_SPOP_SBC_1
816:820
AVSTS
SPOP
0.6394
More...
Q9UBL3
Set1/Ash2 histone methyltransferase complex subunit ASH2
DEG_SPOP_SBC_1
276:280
AVSTS
SPOP
0.9612
More...
Q63HK3
Zinc finger protein with KRAB and SCAN domains 2
DEG_SPOP_SBC_1
271:275
AVSTS
SPOP
0.9672
More...
Q6PJG2
Mitotic deacetylase-associated SANT domain protein
DEG_SPOP_SBC_1
55:59
AVSTS
SPOP
0.8176
More...
Q92545
Transmembrane protein 131
DEG_SPOP_SBC_1
16:20
AVSTS
SPOP
0.7143
More...