DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AVSTS
Uniprot ID:
Q9H2F9
Source protein:
Coiled-coil domain-containing protein 68
Source gene:
CCDC68
Class:
DEG_SPOP_SBC_1
Location:
313:317
E3 ligase:
SPOP
DEGRON score:
0.9865
ASA_SCORE:
74.22
COIL:
0.691
CONS_SCORE:
0.7276
DSS_SCORE:
0.4582
HELIX:
0.0568
FCONS_SCORE:
0.9916
RIG_SCORE:
0.7254
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T321N
TCGA-18-4083
LUSC
TCGA
AVSTS
DEG_SPOP_SBC_1
0.2222
p.T321N
DO229038
LICA
ICGC
AVSTS
DEG_SPOP_SBC_1
0.2222
p.T321N
DO26504
LUSC
ICGC
AVSTS
DEG_SPOP_SBC_1
0.2222
p.T316I
TCGA-B0-5115
KIRC
TCGA
AVSTS
DEG_SPOP_SBC_1
0.7078
p.T316I
DO18761
KIRC
ICGC
AVSTS
DEG_SPOP_SBC_1
0.7078
p.S317I
TCGA-EO-A22R
UCEC
TCGA
AVSTS
DEG_SPOP_SBC_1
0.7341
p.S317I
TCGA-FS-A1ZR
SKCM
TCGA
AVSTS
DEG_SPOP_SBC_1
0.7341
p.S317I
DO37651
SKCM
ICGC
AVSTS
DEG_SPOP_SBC_1
0.7341
p.S317I
DO42713
UCEC
ICGC
AVSTS
DEG_SPOP_SBC_1
0.7341
p.S325Y
TCGA-FW-A3R5
SKCM
TCGA
AVSTS
DEG_SPOP_SBC_1
0.1111
p.S325Y
DO37406
SKCM
ICGC
AVSTS
DEG_SPOP_SBC_1
0.1111
p.V310I
TCGA-FW-A3R5
SKCM
TCGA
AVSTS
DEG_SPOP_SBC_1
0.25
p.V310I
DO37406
SKCM
ICGC
AVSTS
DEG_SPOP_SBC_1
0.25
p.V310I
SIDM00999
Bladder Carcinoma
GDSC
AVSTS
DEG_SPOP_SBC_1
0.25
p.V310I
ACH-000973
Bladder Cancer
CCLE
AVSTS
DEG_SPOP_SBC_1
0.25
p.V310I
639-V
urinary_tract
COSMIC
AVSTS
DEG_SPOP_SBC_1
0.25
p.S325F
TCGA-YD-A89C
SKCM
TCGA
AVSTS
DEG_SPOP_SBC_1
0.1111
p.S325F
DO219501
SKCM
ICGC
AVSTS
DEG_SPOP_SBC_1
0.1111
p.E322K
DO234192
ESAD
ICGC
AVSTS
DEG_SPOP_SBC_1
0.1944
p.S317R
DO233652
GACA
ICGC
AVSTS
DEG_SPOP_SBC_1
0.7427
p.V324A
SIDM00567
Other Solid Cancers
GDSC
AVSTS
DEG_SPOP_SBC_1
0.1389
p.V324A
ACH-000776
Brain Cancer
CCLE
AVSTS
DEG_SPOP_SBC_1
0.1389
p.V324A
ONS-76
central_nervous_system
COSMIC
AVSTS
DEG_SPOP_SBC_1
0.1389
p.K309N
SIDM01066
Melanoma
GDSC
AVSTS
DEG_SPOP_SBC_1
0.3333
p.K309N
ACH-000650
Skin Cancer
CCLE
AVSTS
DEG_SPOP_SBC_1
0.3333
p.K309N
IGR-37
skin
COSMIC
AVSTS
DEG_SPOP_SBC_1
0.3333
Drug responses associated with CCDC68 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14776
Transcription elongation regulator 1
DEG_SPOP_SBC_1
269:273
AVSTS
SPOP
0.9767
More...
O95271
Poly [ADP-ribose] polymerase tankyrase-1
DEG_SPOP_SBC_1
107:111
AVSTS
SPOP
0.7984
More...
P35914
Hydroxymethylglutaryl-CoA lyase, mitochondrial
DEG_SPOP_SBC_1
20:24
AVSTS
SPOP
0.9441
More...
P43146
Netrin receptor DCC
DEG_SPOP_SBC_1
536:540
AVSTS
SPOP
0.6288
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
397:401
AVSTS
SPOP
0.9758
More...
Q9BQQ3
Golgi reassembly-stacking protein 1
DEG_SPOP_SBC_1
337:341
AVSTS
SPOP
0.9472
More...
Q9H2F9
Coiled-coil domain-containing protein 68
DEG_SPOP_SBC_1
313:317
AVSTS
SPOP
0.9865
More...
Q9HCE6
Rho guanine nucleotide exchange factor 10-like protein
DEG_SPOP_SBC_1
816:820
AVSTS
SPOP
0.6394
More...
Q9UBL3
Set1/Ash2 histone methyltransferase complex subunit ASH2
DEG_SPOP_SBC_1
276:280
AVSTS
SPOP
0.9612
More...
Q63HK3
Zinc finger protein with KRAB and SCAN domains 2
DEG_SPOP_SBC_1
271:275
AVSTS
SPOP
0.9672
More...
Q6PJG2
Mitotic deacetylase-associated SANT domain protein
DEG_SPOP_SBC_1
55:59
AVSTS
SPOP
0.8176
More...
Q92545
Transmembrane protein 131
DEG_SPOP_SBC_1
16:20
AVSTS
SPOP
0.7143
More...