DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KKENK
Uniprot ID:
P78414
Source protein:
Iroquois-class homeodomain protein IRX-1
Source gene:
IRX1
Class:
DEG_APCC_KENBOX_2
Location:
186:190
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8603
ASA_SCORE:
123.9
COIL:
0.5564
CONS_SCORE:
0.6551
DSS_SCORE:
0.3858
HELIX:
0.4288
FCONS_SCORE:
1.0004
RIG_SCORE:
0.7852
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D199H
TCGA-17-Z041
LUAD
TCGA
KKENK
DEG_APCC_KENBOX_2
0.0833
p.Q200K
TCGA-55-A490
LUAD
TCGA
KKENK
DEG_APCC_KENBOX_2
0.0556
p.Q200K
TCGA-BB-7870
HNSC
TCGA
KKENK
DEG_APCC_KENBOX_2
0.0556
p.Q200K
TCGA-FD-A5BZ
BLCA
TCGA
KKENK
DEG_APCC_KENBOX_2
0.0556
p.Q200K
DO44052
BLCA
ICGC
KKENK
DEG_APCC_KENBOX_2
0.0556
p.Q200K
DO14378
HNSC
ICGC
KKENK
DEG_APCC_KENBOX_2
0.0556
p.Q200K
DO24596
LUAD
ICGC
KKENK
DEG_APCC_KENBOX_2
0.0556
p.R196L
TCGA-78-7220
LUAD
TCGA
KKENK
DEG_APCC_KENBOX_2
0.1667
p.R196L
DO24409
LUAD
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1667
p.R183Q
TCGA-AP-A0LM
UCEC
TCGA
KKENK
DEG_APCC_KENBOX_2
0.25
p.R183Q
DO43306
UCEC
ICGC
KKENK
DEG_APCC_KENBOX_2
0.25
p.A195E
TCGA-B0-5084
KIRC
TCGA
KKENK
DEG_APCC_KENBOX_2
0.1944
p.A195E
DO19713
KIRC
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.R184H
TCGA-B5-A3FA
UCEC
TCGA
KKENK
DEG_APCC_KENBOX_2
0.2778
p.R184H
DO52402
UCEC
ICGC
KKENK
DEG_APCC_KENBOX_2
0.2778
p.R184H
SIDM00216
Colorectal Carcinoma
GDSC
KKENK
DEG_APCC_KENBOX_2
0.2778
p.R184H
ACH-000989
Colon/Colorectal Cancer
CCLE
KKENK
DEG_APCC_KENBOX_2
0.2778
p.R184H
SNU-175
large_intestine
COSMIC
KKENK
DEG_APCC_KENBOX_2
0.2778
p.Q200H
TCGA-BA-6869
HNSC
TCGA
KKENK
DEG_APCC_KENBOX_2
0.0556
p.Q200H
DO14250
HNSC
ICGC
KKENK
DEG_APCC_KENBOX_2
0.0556
p.N189K
TCGA-C8-A274
BRCA
TCGA
KKENK
DEG_APCC_KENBOX_2
0.6918
p.N189K
DO5675
BRCA
ICGC
KKENK
DEG_APCC_KENBOX_2
0.6918
p.A181V
TCGA-CK-5913
COAD
TCGA
KKENK
DEG_APCC_KENBOX_2
0.1944
p.A181V
DO8826
COAD
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.A181V
DO233647
GACA
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.A181V
DO233941
GACA
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.R183W
TCGA-D1-A103
UCEC
TCGA
KKENK
DEG_APCC_KENBOX_2
0.25
p.R183W
DO42312
UCEC
ICGC
KKENK
DEG_APCC_KENBOX_2
0.25
p.W177C
TCGA-D5-5540
COAD
TCGA
KKENK
DEG_APCC_KENBOX_2
0.0833
p.W177C
DO8738
COAD
ICGC
KKENK
DEG_APCC_KENBOX_2
0.0833
p.R196C
TCGA-DF-A2KV
UCEC
TCGA
KKENK
DEG_APCC_KENBOX_2
0.1667
p.R196C
DO233245
GACA
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1667
p.R196C
DO219771
UCEC
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1667
p.R182C
TCGA-EJ-5496
PRAD
TCGA
KKENK
DEG_APCC_KENBOX_2
0.2222
p.R182C
DO36266
PRAD
ICGC
KKENK
DEG_APCC_KENBOX_2
0.2222
p.E188D
TCGA-F5-6814
READ
TCGA
KKENK
DEG_APCC_KENBOX_2
0.6758
p.E188D
DO36556
READ
ICGC
KKENK
DEG_APCC_KENBOX_2
0.6758
p.A179T
TCGA-FG-6692
LGG
TCGA
KKENK
DEG_APCC_KENBOX_2
0.1389
p.A179T
DO22307
LGG
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1389
p.T176A
TCGA-FP-7829
STAD
TCGA
KKENK
DEG_APCC_KENBOX_2
0.0556
p.T176A
DO38308
STAD
ICGC
KKENK
DEG_APCC_KENBOX_2
0.0556
p.K198N
TCGA-G4-6309
COAD
TCGA
KKENK
DEG_APCC_KENBOX_2
0.2222
p.K198N
DO7810
COAD
ICGC
KKENK
DEG_APCC_KENBOX_2
0.2222
p.L185F
TCGA-HU-A4GT
STAD
TCGA
KKENK
DEG_APCC_KENBOX_2
0.3056
p.L185F
DO48020
STAD
ICGC
KKENK
DEG_APCC_KENBOX_2
0.3056
p.R184L
TCGA-L9-A7SV
LUAD
TCGA
KKENK
DEG_APCC_KENBOX_2
0.2778
p.R184L
DO49875
LUAD
ICGC
KKENK
DEG_APCC_KENBOX_2
0.2778
p.A181T
TCGA-VS-A8QF
CESC
TCGA
KKENK
DEG_APCC_KENBOX_2
0.1944
p.A181T
DO51629
CESC
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.A181T
DO233888
GACA
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.R196H
DO227984
COCA
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1667
p.R196H
ACH-002287
Colon/Colorectal Cancer
CCLE
KKENK
DEG_APCC_KENBOX_2
0.1667
p.R196H
NCI-H630
large_intestine
COSMIC
KKENK
DEG_APCC_KENBOX_2
0.1667
p.A195T
DO22812
LICA
ICGC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.K186N
DO33091
PACA
ICGC
KKENK
DEG_APCC_KENBOX_2
0.5806
p.A195V
SIDM00781
Colorectal Carcinoma
GDSC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.A195V
SIDM00780
Colorectal Carcinoma
GDSC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.A195V
ACH-000967
Colon/Colorectal Cancer
CCLE
KKENK
DEG_APCC_KENBOX_2
0.1944
p.A195V
ACH-001199
Colon/Colorectal Cancer
CCLE
KKENK
DEG_APCC_KENBOX_2
0.1944
p.A195V
SNU-C2B
large_intestine
COSMIC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.S197N
SIDM00239
Kidney Carcinoma
GDSC
KKENK
DEG_APCC_KENBOX_2
0.1389
p.S197N
ACH-000159
Kidney Cancer
CCLE
KKENK
DEG_APCC_KENBOX_2
0.1389
p.S197N
OS-RC-2
kidney
COSMIC
KKENK
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with IRX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14647
Chromodomain-helicase-DNA-binding protein 2
DEG_APCC_KENBOX_2
1347:1351
KKENK
APC,CDC20,FZR1
0.6193
More...
P09629
Homeobox protein Hox-B7
DEG_APCC_KENBOX_2
193:197
KKENK
APC,CDC20,FZR1
0.5932
More...
P78411
Iroquois-class homeodomain protein IRX-5
DEG_APCC_KENBOX_2
172:176
KKENK
APC,CDC20,FZR1
0.8587
More...
P78412
Iroquois-class homeodomain protein IRX-6
DEG_APCC_KENBOX_2
205:209
KKENK
APC,CDC20,FZR1
0.8695
More...
P78413
Iroquois-class homeodomain protein IRX-4
DEG_APCC_KENBOX_2
201:205
KKENK
APC,CDC20,FZR1
0.9359
More...
Q9H0A6
RING finger protein 32
DEG_APCC_KENBOX_2
46:50
KKENK
APC,CDC20,FZR1
0.9703
More...
Q9NQS3
Nectin-3
DEG_APCC_KENBOX_2
471:475
KKENK
APC,CDC20,FZR1
0.5241
More...
Q9NSI6
Bromodomain and WD repeat-containing protein 1
DEG_APCC_KENBOX_2
914:918
KKENK
APC,CDC20,FZR1
0.8734
More...
P31267
Homeobox protein Hox-A6
DEG_APCC_KENBOX_2
211:215
KKENK
APC,CDC20,FZR1
0.8614
More...
P78414
Iroquois-class homeodomain protein IRX-1
DEG_APCC_KENBOX_2
186:190
KKENK
APC,CDC20,FZR1
0.8603
More...