DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KKENK
Uniprot ID:
Q9NQS3
Source protein:
Nectin-3
Source gene:
NECTIN3
Class:
DEG_APCC_KENBOX_2
Location:
471:475
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5241
ASA_SCORE:
127.14
COIL:
0.876
CONS_SCORE:
0.528
DSS_SCORE:
0.5482
HELIX:
0.0794
FCONS_SCORE:
1.0543
RIG_SCORE:
0.6737
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N480S
SIDM00584
Osteosarcoma
GDSC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.N480S
SIDM00560
Gastric Carcinoma
GDSC
KKENK
DEG_APCC_KENBOX_2
0.1944
p.N474K
SIDM01986
Non-Small Cell Lung Carcinoma
GDSC
KKENK
DEG_APCC_KENBOX_2
0.6918
p.N474K
SIDM00903
Non-Small Cell Lung Carcinoma
GDSC
KKENK
DEG_APCC_KENBOX_2
0.6918
p.N474K
A549
lung
COSMIC
KKENK
DEG_APCC_KENBOX_2
0.6918
Drug responses associated with NECTIN3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14647
Chromodomain-helicase-DNA-binding protein 2
DEG_APCC_KENBOX_2
1347:1351
KKENK
APC,CDC20,FZR1
0.6193
More...
P09629
Homeobox protein Hox-B7
DEG_APCC_KENBOX_2
193:197
KKENK
APC,CDC20,FZR1
0.5932
More...
P78411
Iroquois-class homeodomain protein IRX-5
DEG_APCC_KENBOX_2
172:176
KKENK
APC,CDC20,FZR1
0.8587
More...
P78412
Iroquois-class homeodomain protein IRX-6
DEG_APCC_KENBOX_2
205:209
KKENK
APC,CDC20,FZR1
0.8695
More...
P78413
Iroquois-class homeodomain protein IRX-4
DEG_APCC_KENBOX_2
201:205
KKENK
APC,CDC20,FZR1
0.9359
More...
Q9H0A6
RING finger protein 32
DEG_APCC_KENBOX_2
46:50
KKENK
APC,CDC20,FZR1
0.9703
More...
Q9NQS3
Nectin-3
DEG_APCC_KENBOX_2
471:475
KKENK
APC,CDC20,FZR1
0.5241
More...
Q9NSI6
Bromodomain and WD repeat-containing protein 1
DEG_APCC_KENBOX_2
914:918
KKENK
APC,CDC20,FZR1
0.8734
More...
P31267
Homeobox protein Hox-A6
DEG_APCC_KENBOX_2
211:215
KKENK
APC,CDC20,FZR1
0.8614
More...
P78414
Iroquois-class homeodomain protein IRX-1
DEG_APCC_KENBOX_2
186:190
KKENK
APC,CDC20,FZR1
0.8603
More...