DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KKENN
Uniprot ID:
P13378
Source protein:
Homeobox protein Hox-D8
Source gene:
HOXD8
Class:
DEG_APCC_KENBOX_2
Location:
253:257
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5012
ASA_SCORE:
110.7
COIL:
0.6892
CONS_SCORE:
0.6281
DSS_SCORE:
0.4714
HELIX:
0.2828
FCONS_SCORE:
0.9332
RIG_SCORE:
0.7325
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D259G
TCGA-AA-3510
COAD
TCGA
KKENN
DEG_APCC_KENBOX_2
0.2778
p.F261C
TCGA-AA-A010
COAD
TCGA
KKENN
DEG_APCC_KENBOX_2
0.2222
p.F261C
TCGA-B5-A11N
UCEC
TCGA
KKENN
DEG_APCC_KENBOX_2
0.2222
p.D259E
TCGA-OR-A5KB
ACC
TCGA
KKENN
DEG_APCC_KENBOX_2
0.2778
p.D258G
DO7783
COAD
ICGC
KKENN
DEG_APCC_KENBOX_2
0.3056
p.F260C
DO41458
UCEC
ICGC
KKENN
DEG_APCC_KENBOX_2
0.3611
p.P262L
SIDM00763
Non-Small Cell Lung Carcinoma
GDSC
KKENN
DEG_APCC_KENBOX_2
0.1944
p.P262L
NCI-H1915
lung
COSMIC
KKENN
DEG_APCC_KENBOX_2
0.1944
p.P261L
NCI-H1915
lung
COSMIC
KKENN
DEG_APCC_KENBOX_2
0.2222
Drug responses associated with HOXD8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13378
Homeobox protein Hox-D8
DEG_APCC_KENBOX_2
253:257
KKENN
APC,CDC20,FZR1
0.5012
More...
P17481
Homeobox protein Hox-B8
DEG_APCC_KENBOX_2
202:206
KKENN
APC,CDC20,FZR1
0.8038
More...
P49454
Centromere protein F
DEG_APCC_KENBOX_2
485:489
KKENN
APC,CDC20,FZR1
0.9739
More...
Q17RS7
Flap endonuclease GEN homolog 1
DEG_APCC_KENBOX_2
882:886
KKENN
APC,CDC20,FZR1
0.8381
More...
Q5VV43
Dyslexia-associated protein KIAA0319
DEG_APCC_KENBOX_2
712:716
KKENN
APC,CDC20,FZR1
0.9185
More...
Q5VXU9
Protein shortage in chiasmata 1 ortholog
DEG_APCC_KENBOX_2
479:483
KKENN
APC,CDC20,FZR1
0.8057
More...
Q8IYD8
Fanconi anemia group M protein
DEG_APCC_KENBOX_2
867:871
KKENN
APC,CDC20,FZR1
0.9394
More...
Q9Y6Q9
Nuclear receptor coactivator 3
DEG_APCC_KENBOX_2
731:735
KKENN
APC,CDC20,FZR1
0.8256
More...