DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
KKENN
Uniprot ID:
P17481
Source protein:
Homeobox protein Hox-B8
Source gene:
HOXB8
Class:
DEG_APCC_KENBOX_2
Location:
202:206
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8038
ASA_SCORE:
115
COIL:
0.7484
CONS_SCORE:
0.6246
DSS_SCORE:
0.4964
HELIX:
0.2356
FCONS_SCORE:
0.9669
RIG_SCORE:
0.7214
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R197W
TCGA-CK-4951
COAD
TCGA
KKENN
DEG_APCC_KENBOX_2
0.1944
p.E216K
TCGA-E7-A7XN
BLCA
TCGA
KKENN
DEG_APCC_KENBOX_2
0.0556
p.E216K
DO51878
BLCA
ICGC
KKENN
DEG_APCC_KENBOX_2
0.0556
p.R196W
DO10582
COAD
ICGC
KKENN
DEG_APCC_KENBOX_2
0.1667
p.S212R
DO233792
GACA
ICGC
KKENN
DEG_APCC_KENBOX_2
0.1667
p.N204K
DO229038
LICA
ICGC
KKENN
DEG_APCC_KENBOX_2
0.6918
p.K200N
SIDM00631
Breast Carcinoma
GDSC
KKENN
DEG_APCC_KENBOX_2
0.2778
p.K200N
ACH-001358
Breast Cancer
CCLE
KKENN
DEG_APCC_KENBOX_2
0.2778
p.K200N
MDA-MB-330
breast
COSMIC
KKENN
DEG_APCC_KENBOX_2
0.2778
p.K199N
MDA-MB-330
breast
COSMIC
KKENN
DEG_APCC_KENBOX_2
0.25
Drug responses associated with HOXB8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13378
Homeobox protein Hox-D8
DEG_APCC_KENBOX_2
253:257
KKENN
APC,CDC20,FZR1
0.5012
More...
P17481
Homeobox protein Hox-B8
DEG_APCC_KENBOX_2
202:206
KKENN
APC,CDC20,FZR1
0.8038
More...
P49454
Centromere protein F
DEG_APCC_KENBOX_2
485:489
KKENN
APC,CDC20,FZR1
0.9739
More...
Q17RS7
Flap endonuclease GEN homolog 1
DEG_APCC_KENBOX_2
882:886
KKENN
APC,CDC20,FZR1
0.8381
More...
Q5VV43
Dyslexia-associated protein KIAA0319
DEG_APCC_KENBOX_2
712:716
KKENN
APC,CDC20,FZR1
0.9185
More...
Q5VXU9
Protein shortage in chiasmata 1 ortholog
DEG_APCC_KENBOX_2
479:483
KKENN
APC,CDC20,FZR1
0.8057
More...
Q8IYD8
Fanconi anemia group M protein
DEG_APCC_KENBOX_2
867:871
KKENN
APC,CDC20,FZR1
0.9394
More...
Q9Y6Q9
Nuclear receptor coactivator 3
DEG_APCC_KENBOX_2
731:735
KKENN
APC,CDC20,FZR1
0.8256
More...