DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
KKENN
Uniprot ID:
Q5VXU9
Source protein:
Protein shortage in chiasmata 1 ortholog
Source gene:
SHOC1
Class:
DEG_APCC_KENBOX_2
Location:
479:483
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8057
ASA_SCORE:
127.44
COIL:
0.8958
CONS_SCORE:
0.6174
DSS_SCORE:
0.5575
HELIX:
0.0726
FCONS_SCORE:
1.0168
RIG_SCORE:
0.7023
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G492R
SIDM00671
T-Cell Non-Hodgkin's Lymphoma
GDSC
KKENN
DEG_APCC_KENBOX_2
0.0833
p.G492R
HH
haematopoietic_and_lymphoid_tissue
COSMIC
KKENN
DEG_APCC_KENBOX_2
0.0833
p.F486Y
SIDM00671
T-Cell Non-Hodgkin's Lymphoma
GDSC
KKENN
DEG_APCC_KENBOX_2
0.25
p.F486Y
HH
haematopoietic_and_lymphoid_tissue
COSMIC
KKENN
DEG_APCC_KENBOX_2
0.25
p.P493L
SIDM01045
Endometrial Carcinoma
GDSC
KKENN
DEG_APCC_KENBOX_2
0.0556
p.P493L
EN
endometrium
COSMIC
KKENN
DEG_APCC_KENBOX_2
0.0556
p.N483T
SIDM00290
Gastric Carcinoma
GDSC
KKENN
DEG_APCC_KENBOX_2
0.5944
p.N483T
HGC-27
stomach
COSMIC
KKENN
DEG_APCC_KENBOX_2
0.5944
p.I476V
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
KKENN
DEG_APCC_KENBOX_2
0.25
Drug responses associated with SHOC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13378
Homeobox protein Hox-D8
DEG_APCC_KENBOX_2
253:257
KKENN
APC,CDC20,FZR1
0.5012
More...
P17481
Homeobox protein Hox-B8
DEG_APCC_KENBOX_2
202:206
KKENN
APC,CDC20,FZR1
0.8038
More...
P49454
Centromere protein F
DEG_APCC_KENBOX_2
485:489
KKENN
APC,CDC20,FZR1
0.9739
More...
Q17RS7
Flap endonuclease GEN homolog 1
DEG_APCC_KENBOX_2
882:886
KKENN
APC,CDC20,FZR1
0.8381
More...
Q5VV43
Dyslexia-associated protein KIAA0319
DEG_APCC_KENBOX_2
712:716
KKENN
APC,CDC20,FZR1
0.9185
More...
Q5VXU9
Protein shortage in chiasmata 1 ortholog
DEG_APCC_KENBOX_2
479:483
KKENN
APC,CDC20,FZR1
0.8057
More...
Q8IYD8
Fanconi anemia group M protein
DEG_APCC_KENBOX_2
867:871
KKENN
APC,CDC20,FZR1
0.9394
More...
Q9Y6Q9
Nuclear receptor coactivator 3
DEG_APCC_KENBOX_2
731:735
KKENN
APC,CDC20,FZR1
0.8256
More...