DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCTST
Uniprot ID:
Q01851
Source protein:
POU domain, class 4, transcription factor 1
Source gene:
POU4F1
Class:
DEG_SPOP_SBC_1
Location:
89:93
E3 ligase:
SPOP
DEGRON score:
0.8746
ASA_SCORE:
85
COIL:
0.9374
CONS_SCORE:
0.5097
DSS_SCORE:
0.4347
HELIX:
0.0388
FCONS_SCORE:
1.2349
RIG_SCORE:
0.6565
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N86D
TCGA-33-4583
LUSC
TCGA
PCTST
DEG_SPOP_SBC_1
0.25
p.N86D
DO27112
LUSC
ICGC
PCTST
DEG_SPOP_SBC_1
0.25
p.H83Q
TCGA-BR-6565
STAD
TCGA
PCTST
DEG_SPOP_SBC_1
0.1667
p.H83Q
DO38843
STAD
ICGC
PCTST
DEG_SPOP_SBC_1
0.1667
p.D79V
TCGA-DI-A1BU
UCEC
TCGA
PCTST
DEG_SPOP_SBC_1
0.0556
p.D79V
DO42023
UCEC
ICGC
PCTST
DEG_SPOP_SBC_1
0.0556
p.T84M
DO10841
ESAD
ICGC
PCTST
DEG_SPOP_SBC_1
0.1944
p.H102Y
DO27811
MALY
ICGC
PCTST
DEG_SPOP_SBC_1
0.0833
p.C90F
DO37259
READ
ICGC
PCTST
DEG_SPOP_SBC_1
0.5996
p.P89R
SIDM00211
B-Lymphoblastic Leukemia
GDSC
PCTST
DEG_SPOP_SBC_1
0.7512
p.P89R
ACH-002209
Leukemia
CCLE
PCTST
DEG_SPOP_SBC_1
0.7512
p.P89R
ALL-PO
haematopoietic_and_lymphoid_tissue
COSMIC
PCTST
DEG_SPOP_SBC_1
0.7512
p.D79E
SIDM00719
Small Cell Lung Carcinoma
GDSC
PCTST
DEG_SPOP_SBC_1
0.0556
p.D79E
ACH-001364
Lung Cancer
CCLE
PCTST
DEG_SPOP_SBC_1
0.0556
p.D79E
NCI-H345
lung
COSMIC
PCTST
DEG_SPOP_SBC_1
0.0556
p.Y82H
SIDM00537
Colorectal Carcinoma
GDSC
PCTST
DEG_SPOP_SBC_1
0.1389
p.Y82H
ACH-000982
Colon/Colorectal Cancer
CCLE
PCTST
DEG_SPOP_SBC_1
0.1389
p.Y82H
ACH-001345
Colon/Colorectal Cancer
CCLE
PCTST
DEG_SPOP_SBC_1
0.1389
p.Y82H
GP5d
large_intestine
COSMIC
PCTST
DEG_SPOP_SBC_1
0.1389
p.T95A
SIDM00982
Glioblastoma
GDSC
PCTST
DEG_SPOP_SBC_1
0.2778
p.T95A
SIDM01760
Rhabdomyosarcoma
GDSC
PCTST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with POU4F1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14917
Protocadherin-17
DEG_SPOP_SBC_1
1046:1050
PCTST
SPOP
0.9985
More...
Q01851
POU domain, class 4, transcription factor 1
DEG_SPOP_SBC_1
89:93
PCTST
SPOP
0.8746
More...
Q12816
Trophinin
DEG_SPOP_SBC_1
923:927
PCTST
SPOP
0.7275
More...
Q15319
POU domain, class 4, transcription factor 3
DEG_SPOP_SBC_1
87:91
PCTST
SPOP
0.9732
More...
Q6ZN17
Protein lin-28 homolog B
DEG_SPOP_SBC_1
186:190
PCTST
SPOP
0.9507
More...
Q8IUM7
Neuronal PAS domain-containing protein 4
DEG_SPOP_SBC_1
503:507
PCTST
SPOP
0.8959
More...
Q8WW38
Zinc finger protein ZFPM2
DEG_SPOP_SBC_1
769:773
PCTST
SPOP
0.5014
More...
Q9Y2X3
Nucleolar protein 58
DEG_SPOP_SBC_1
506:510
PCTST
SPOP
0.9963
More...