DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCTST
Uniprot ID:
Q8WW38
Source protein:
Zinc finger protein ZFPM2
Source gene:
ZFPM2
Class:
DEG_SPOP_SBC_1
Location:
769:773
E3 ligase:
SPOP
DEGRON score:
0.5014
ASA_SCORE:
71.52
COIL:
0.8408
CONS_SCORE:
0.436
DSS_SCORE:
0.4101
HELIX:
0.0932
FCONS_SCORE:
1.1183
RIG_SCORE:
0.7052
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L761P
TCGA-2H-A9GF
ESCA
TCGA
PCTST
DEG_SPOP_SBC_1
0.1111
p.G779R
TCGA-55-8207
LUAD
TCGA
PCTST
DEG_SPOP_SBC_1
0.1667
p.G779R
DO45351
LUAD
ICGC
PCTST
DEG_SPOP_SBC_1
0.1667
p.P776T
TCGA-61-1913
OV
TCGA
PCTST
DEG_SPOP_SBC_1
0.25
p.P776T
DO32069
OV
ICGC
PCTST
DEG_SPOP_SBC_1
0.25
p.C770S
TCGA-AA-3831
COAD
TCGA
PCTST
DEG_SPOP_SBC_1
0.643
p.C770S
DO8538
COAD
ICGC
PCTST
DEG_SPOP_SBC_1
0.643
p.P776S
TCGA-CA-6717
COAD
TCGA
PCTST
DEG_SPOP_SBC_1
0.25
p.P776S
DO8264
COAD
ICGC
PCTST
DEG_SPOP_SBC_1
0.25
p.P769H
TCGA-EE-A2GR
SKCM
TCGA
PCTST
DEG_SPOP_SBC_1
0.7694
p.P769H
DO37996
SKCM
ICGC
PCTST
DEG_SPOP_SBC_1
0.7694
p.T771I
TCGA-EO-A3AY
UCEC
TCGA
PCTST
DEG_SPOP_SBC_1
0.7078
p.T771I
DO43202
UCEC
ICGC
PCTST
DEG_SPOP_SBC_1
0.7078
p.L780I
TCGA-EO-A3AY
UCEC
TCGA
PCTST
DEG_SPOP_SBC_1
0.1389
p.L780I
DO43202
UCEC
ICGC
PCTST
DEG_SPOP_SBC_1
0.1389
p.P769S
TCGA-FS-A1Z3
SKCM
TCGA
PCTST
DEG_SPOP_SBC_1
0.6752
p.P769S
DO37635
SKCM
ICGC
PCTST
DEG_SPOP_SBC_1
0.6752
p.Q774L
TCGA-L9-A7SV
LUAD
TCGA
PCTST
DEG_SPOP_SBC_1
0.3056
p.Q774L
DO49875
LUAD
ICGC
PCTST
DEG_SPOP_SBC_1
0.3056
p.D762Y
TCGA-NJ-A4YF
LUAD
TCGA
PCTST
DEG_SPOP_SBC_1
0.1389
p.D762Y
DO218940
LUAD
ICGC
PCTST
DEG_SPOP_SBC_1
0.1389
p.G781E
TCGA-YD-A89C
SKCM
TCGA
PCTST
DEG_SPOP_SBC_1
0.1111
p.G781E
DO219501
SKCM
ICGC
PCTST
DEG_SPOP_SBC_1
0.1111
p.N765S
DO222973
BTCA
ICGC
PCTST
DEG_SPOP_SBC_1
0.2222
p.T771A
DO228656
GACA
ICGC
PCTST
DEG_SPOP_SBC_1
0.7139
p.L761R
DO233949
GACA
ICGC
PCTST
DEG_SPOP_SBC_1
0.1111
p.L761I
DO231495
THCA
ICGC
PCTST
DEG_SPOP_SBC_1
0.1111
p.V763I
SIDM00718
Non-Small Cell Lung Carcinoma
GDSC
PCTST
DEG_SPOP_SBC_1
0.1667
p.V763I
SIDM01178
Other Solid Cancers
GDSC
PCTST
DEG_SPOP_SBC_1
0.1667
p.V763I
SIDM01083
Oral Cavity Carcinoma
GDSC
PCTST
DEG_SPOP_SBC_1
0.1667
p.N767S
SIDM00412
B-Cell Non-Hodgkin's Lymphoma
GDSC
PCTST
DEG_SPOP_SBC_1
0.2778
p.N767S
WSU-NHL
haematopoietic_and_lymphoid_tissue
COSMIC
PCTST
DEG_SPOP_SBC_1
0.2778
p.S780N
SNU-1040
large_intestine
COSMIC
PCTST
DEG_SPOP_SBC_1
0.1389
p.K761E
CW-2
large_intestine
COSMIC
PCTST
DEG_SPOP_SBC_1
0.1111
Drug responses associated with ZFPM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14917
Protocadherin-17
DEG_SPOP_SBC_1
1046:1050
PCTST
SPOP
0.9985
More...
Q01851
POU domain, class 4, transcription factor 1
DEG_SPOP_SBC_1
89:93
PCTST
SPOP
0.8746
More...
Q12816
Trophinin
DEG_SPOP_SBC_1
923:927
PCTST
SPOP
0.7275
More...
Q15319
POU domain, class 4, transcription factor 3
DEG_SPOP_SBC_1
87:91
PCTST
SPOP
0.9732
More...
Q6ZN17
Protein lin-28 homolog B
DEG_SPOP_SBC_1
186:190
PCTST
SPOP
0.9507
More...
Q8IUM7
Neuronal PAS domain-containing protein 4
DEG_SPOP_SBC_1
503:507
PCTST
SPOP
0.8959
More...
Q8WW38
Zinc finger protein ZFPM2
DEG_SPOP_SBC_1
769:773
PCTST
SPOP
0.5014
More...
Q9Y2X3
Nucleolar protein 58
DEG_SPOP_SBC_1
506:510
PCTST
SPOP
0.9963
More...