DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCTST
Uniprot ID:
Q12816
Source protein:
Trophinin
Source gene:
TRO
Class:
DEG_SPOP_SBC_1
Location:
923:927
E3 ligase:
SPOP
DEGRON score:
0.7275
ASA_SCORE:
80.22
COIL:
0.8984
CONS_SCORE:
0.4116
DSS_SCORE:
0.1725
HELIX:
0.0358
FCONS_SCORE:
0.8046
RIG_SCORE:
0.7377
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G920S
TCGA-A5-A2K5
UCEC
TCGA
PCTST
DEG_SPOP_SBC_1
0.25
p.G920S
DO231673
LINC
ICGC
PCTST
DEG_SPOP_SBC_1
0.25
p.G920S
DO41379
UCEC
ICGC
PCTST
DEG_SPOP_SBC_1
0.25
p.G915C
DO230342
COCA
ICGC
PCTST
DEG_SPOP_SBC_1
0.1111
p.G915V
DO229018
LICA
ICGC
PCTST
DEG_SPOP_SBC_1
0.1111
p.G915V
DO220007
SARC
ICGC
PCTST
DEG_SPOP_SBC_1
0.1111
p.S929I
DO229026
LICA
ICGC
PCTST
DEG_SPOP_SBC_1
0.2778
p.D931E
DO26608
LUSC
ICGC
PCTST
DEG_SPOP_SBC_1
0.2222
p.D931E
DO27381
LUSC
ICGC
PCTST
DEG_SPOP_SBC_1
0.2222
p.T935A
SIDM00193
Colorectal Carcinoma
GDSC
PCTST
DEG_SPOP_SBC_1
0.1111
p.T935A
ACH-000991
Colon/Colorectal Cancer
CCLE
PCTST
DEG_SPOP_SBC_1
0.1111
p.T935A
SNU-81
large_intestine
COSMIC
PCTST
DEG_SPOP_SBC_1
0.1111
p.P926L
OE19
oesophagus
COSMIC
PCTST
DEG_SPOP_SBC_1
0.7582
p.P921L
SK-MEL-30
skin
COSMIC
PCTST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with TRO mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14917
Protocadherin-17
DEG_SPOP_SBC_1
1046:1050
PCTST
SPOP
0.9985
More...
Q01851
POU domain, class 4, transcription factor 1
DEG_SPOP_SBC_1
89:93
PCTST
SPOP
0.8746
More...
Q12816
Trophinin
DEG_SPOP_SBC_1
923:927
PCTST
SPOP
0.7275
More...
Q15319
POU domain, class 4, transcription factor 3
DEG_SPOP_SBC_1
87:91
PCTST
SPOP
0.9732
More...
Q6ZN17
Protein lin-28 homolog B
DEG_SPOP_SBC_1
186:190
PCTST
SPOP
0.9507
More...
Q8IUM7
Neuronal PAS domain-containing protein 4
DEG_SPOP_SBC_1
503:507
PCTST
SPOP
0.8959
More...
Q8WW38
Zinc finger protein ZFPM2
DEG_SPOP_SBC_1
769:773
PCTST
SPOP
0.5014
More...
Q9Y2X3
Nucleolar protein 58
DEG_SPOP_SBC_1
506:510
PCTST
SPOP
0.9963
More...