DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PDTSS
Uniprot ID:
P36956
Source protein:
Sterol regulatory element-binding protein 1
Source gene:
SREBF1
Class:
DEG_SPOP_SBC_1
Location:
64:68
E3 ligase:
SPOP
DEGRON score:
0.999
ASA_SCORE:
77.8
COIL:
0.958
CONS_SCORE:
0.2915
DSS_SCORE:
0.7924
HELIX:
0.0194
FCONS_SCORE:
1.0942
RIG_SCORE:
0.5465
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F59Y
TCGA-55-8511
LUAD
TCGA
PDTSS
DEG_SPOP_SBC_1
0.6389
p.F59Y
DO24940
LUAD
ICGC
PDTSS
DEG_SPOP_SBC_1
0.6389
p.N68D
TCGA-A5-A0G1
UCEC
TCGA
PDTSS
DEG_SPOP_SBC_1
0.6932
p.A54S
TCGA-ZB-A966
THYM
TCGA
PDTSS
DEG_SPOP_SBC_1
0.0556
p.S63F
DO51632
CESC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.75
p.P76A
DO6254
CESC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1111
p.A76T
DO8400
COAD
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1111
p.G58D
DO17801
KIRC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1667
p.S58G
DO20942
KIRP
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1667
p.G57R
DO44584
LGG
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1389
p.A62D
DO229041
LICA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.2778
p.S68P
DO22959
LIHC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.6752
p.R71L
DO26695
LUSC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.25
p.I77T
DO219875
SKCA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.0833
p.R67H
DO38214
STAD
ICGC
PDTSS
DEG_SPOP_SBC_1
0.8244
p.T72I
DO229221
THCA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.2222
p.R71H
DO43306
UCEC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.25
p.A55T
DO41871
UCEC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.0833
p.N75S
DO41235
UCEC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1389
p.P76H
DO41103
UCEC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1111
p.P74S
SIDM00190
Melanoma
GDSC
PDTSS
DEG_SPOP_SBC_1
0.1667
p.P74S
CP66-MEL
skin
COSMIC
PDTSS
DEG_SPOP_SBC_1
0.1667
p.P69T
ACH-000977
lymph_node
CCLE
PDTSS
DEG_SPOP_SBC_1
0.3056
p.P69T
LNCaP-Clone-FGC
prostate
COSMIC
PDTSS
DEG_SPOP_SBC_1
0.3056
p.A62V
ACH-000977
lymph_node
CCLE
PDTSS
DEG_SPOP_SBC_1
0.2778
p.A62V
LNCaP-Clone-FGC
prostate
COSMIC
PDTSS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with SREBF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P36956
Sterol regulatory element-binding protein 1
DEG_SPOP_SBC_1
64:68
PDTSS
SPOP
0.999
More...
Q14689
Disco-interacting protein 2 homolog A
DEG_SPOP_SBC_1
134:138
PDTSS
SPOP
0.9885
More...
Q6PCT2
F-box/LRR-repeat protein 19
DEG_SPOP_SBC_1
321:325
PDTSS
SPOP
0.7927
More...
Q96A33
PAT complex subunit CCDC47
DEG_SPOP_SBC_1
109:113
PDTSS
SPOP
0.8466
More...
Q9H9B1
Histone-lysine N-methyltransferase EHMT1
DEG_SPOP_SBC_1
1287:1291
PDTSS
SPOP
0.9968
More...
Q9NSI6
Bromodomain and WD repeat-containing protein 1
DEG_SPOP_SBC_1
2151:2155
PDTSS
SPOP
0.9929
More...
Q9P265
Disco-interacting protein 2 homolog B
DEG_SPOP_SBC_1
142:146
PDTSS
SPOP
0.9674
More...
Q9Y2E4
Disco-interacting protein 2 homolog C
DEG_SPOP_SBC_1
131:135
PDTSS
SPOP
0.9451
More...
Q8N485
Protein limb expression 1 homolog
DEG_SPOP_SBC_1
263:267
PDTSS
SPOP
0.8481
More...