DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PDTSS
Uniprot ID:
Q9Y2E4
Source protein:
Disco-interacting protein 2 homolog C
Source gene:
DIP2C
Class:
DEG_SPOP_SBC_1
Location:
131:135
E3 ligase:
SPOP
DEGRON score:
0.9451
ASA_SCORE:
82.02
COIL:
0.929
CONS_SCORE:
0.4165
DSS_SCORE:
0.7567
HELIX:
0.046
FCONS_SCORE:
0.9854
RIG_SCORE:
0.5809
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V143L
TCGA-44-8120
LUAD
TCGA
PDTSS
DEG_SPOP_SBC_1
0.1111
p.V143L
TCGA-CV-5436
HNSC
TCGA
PDTSS
DEG_SPOP_SBC_1
0.1111
p.Q144H
TCGA-D3-A3CE
SKCM
TCGA
PDTSS
DEG_SPOP_SBC_1
0.0833
p.T129I
TCGA-ER-A193
SKCM
TCGA
PDTSS
DEG_SPOP_SBC_1
0.2778
p.A126V
DO49095
COAD
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1944
p.A126V
DO227985
COCA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1944
p.A126V
DO38599
STAD
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1944
p.T125K
DO228974
LICA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1667
p.T125K
DO229027
LICA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1667
p.T121K
DO229031
LICA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.0556
p.L134I
DO229035
LICA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.7174
p.Y129H
DO45299
LIRI
ICGC
PDTSS
DEG_SPOP_SBC_1
0.2778
p.E133K
DO35290
PACA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.7022
p.E133K
DO43891
UCEC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.7022
p.S123F
DO37567
SKCM
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1111
p.G122R
DO48665
SKCM
ICGC
PDTSS
DEG_SPOP_SBC_1
0.0833
p.A132T
DO42280
UCEC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.7139
p.Y128H
ACH-000990
Endometrial/Uterine Cancer
CCLE
PDTSS
DEG_SPOP_SBC_1
0.25
p.A127T
ACH-001518
Endometrial/Uterine Cancer
CCLE
PDTSS
DEG_SPOP_SBC_1
0.2222
p.R129C
HCC1954
breast
COSMIC
PDTSS
DEG_SPOP_SBC_1
0.2778
p.R142C
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PDTSS
DEG_SPOP_SBC_1
0.1389
p.R134L
NCI-H460
lung
COSMIC
PDTSS
DEG_SPOP_SBC_1
0.8428
p.R134Q
COR-L32
lung
COSMIC
PDTSS
DEG_SPOP_SBC_1
0.7329
Drug responses associated with DIP2C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P36956
Sterol regulatory element-binding protein 1
DEG_SPOP_SBC_1
64:68
PDTSS
SPOP
0.999
More...
Q14689
Disco-interacting protein 2 homolog A
DEG_SPOP_SBC_1
134:138
PDTSS
SPOP
0.9885
More...
Q6PCT2
F-box/LRR-repeat protein 19
DEG_SPOP_SBC_1
321:325
PDTSS
SPOP
0.7927
More...
Q96A33
PAT complex subunit CCDC47
DEG_SPOP_SBC_1
109:113
PDTSS
SPOP
0.8466
More...
Q9H9B1
Histone-lysine N-methyltransferase EHMT1
DEG_SPOP_SBC_1
1287:1291
PDTSS
SPOP
0.9968
More...
Q9NSI6
Bromodomain and WD repeat-containing protein 1
DEG_SPOP_SBC_1
2151:2155
PDTSS
SPOP
0.9929
More...
Q9P265
Disco-interacting protein 2 homolog B
DEG_SPOP_SBC_1
142:146
PDTSS
SPOP
0.9674
More...
Q9Y2E4
Disco-interacting protein 2 homolog C
DEG_SPOP_SBC_1
131:135
PDTSS
SPOP
0.9451
More...
Q8N485
Protein limb expression 1 homolog
DEG_SPOP_SBC_1
263:267
PDTSS
SPOP
0.8481
More...