DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PDTSS
Uniprot ID:
Q96A33
Source protein:
PAT complex subunit CCDC47
Source gene:
CCDC47
Class:
DEG_SPOP_SBC_1
Location:
109:113
E3 ligase:
SPOP
DEGRON score:
0.8466
ASA_SCORE:
88.06
COIL:
0.9282
CONS_SCORE:
0.247
DSS_SCORE:
0.6745
HELIX:
0.0514
FCONS_SCORE:
0.8696
RIG_SCORE:
0.6169
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I120V
TCGA-91-6840
LUAD
TCGA
PDTSS
DEG_SPOP_SBC_1
0.1389
p.I120V
DO23608
LUAD
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1389
p.P119L
TCGA-BT-A0YX
BLCA
TCGA
PDTSS
DEG_SPOP_SBC_1
0.1667
p.P119L
DO516
BLCA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1667
p.S114R
TCGA-C5-A2LX
CESC
TCGA
PDTSS
DEG_SPOP_SBC_1
0.3056
p.S114R
DO49004
CESC
ICGC
PDTSS
DEG_SPOP_SBC_1
0.3056
p.S114R
DO229025
LICA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.3056
p.E103Q
TCGA-GC-A4ZW
BLCA
TCGA
PDTSS
DEG_SPOP_SBC_1
0.1667
p.E103Q
DO219024
BLCA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1667
p.T111S
DO228205
LICA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.6005
p.T121K
DO229031
LICA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1111
p.D118E
DO229242
THCA
ICGC
PDTSS
DEG_SPOP_SBC_1
0.1944
p.F103L
SF268
central_nervous_system
COSMIC
PDTSS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with CCDC47 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P36956
Sterol regulatory element-binding protein 1
DEG_SPOP_SBC_1
64:68
PDTSS
SPOP
0.999
More...
Q14689
Disco-interacting protein 2 homolog A
DEG_SPOP_SBC_1
134:138
PDTSS
SPOP
0.9885
More...
Q6PCT2
F-box/LRR-repeat protein 19
DEG_SPOP_SBC_1
321:325
PDTSS
SPOP
0.7927
More...
Q96A33
PAT complex subunit CCDC47
DEG_SPOP_SBC_1
109:113
PDTSS
SPOP
0.8466
More...
Q9H9B1
Histone-lysine N-methyltransferase EHMT1
DEG_SPOP_SBC_1
1287:1291
PDTSS
SPOP
0.9968
More...
Q9NSI6
Bromodomain and WD repeat-containing protein 1
DEG_SPOP_SBC_1
2151:2155
PDTSS
SPOP
0.9929
More...
Q9P265
Disco-interacting protein 2 homolog B
DEG_SPOP_SBC_1
142:146
PDTSS
SPOP
0.9674
More...
Q9Y2E4
Disco-interacting protein 2 homolog C
DEG_SPOP_SBC_1
131:135
PDTSS
SPOP
0.9451
More...
Q8N485
Protein limb expression 1 homolog
DEG_SPOP_SBC_1
263:267
PDTSS
SPOP
0.8481
More...