DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PESTT
Uniprot ID:
O95359
Source protein:
Transforming acidic coiled-coil-containing protein 2
Source gene:
TACC2
Class:
DEG_SPOP_SBC_1
Location:
1956:1960
E3 ligase:
SPOP
DEGRON score:
0.9713
ASA_SCORE:
88.42
COIL:
0.932
CONS_SCORE:
0.6327
DSS_SCORE:
0.7998
HELIX:
0.0194
FCONS_SCORE:
1.0053
RIG_SCORE:
0.5566
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1955N
TCGA-2G-AAKH
TGCT
TCGA
PESTT
DEG_SPOP_SBC_1
0.3056
p.P1969S
TCGA-AP-A5FX
UCEC
TCGA
PESTT
DEG_SPOP_SBC_1
0.0833
p.P1970Q
TCGA-D3-A2JK
SKCM
TCGA
PESTT
DEG_SPOP_SBC_1
0.0556
p.E1951D
TCGA-FI-A2D5
UCEC
TCGA
PESTT
DEG_SPOP_SBC_1
0.1944
p.G1957V
DO229006
LICA
ICGC
PESTT
DEG_SPOP_SBC_1
0.7532
p.G1946V
DO23624
LUAD
ICGC
PESTT
DEG_SPOP_SBC_1
0.5
p.G1957D
DO37429
SKCM
ICGC
PESTT
DEG_SPOP_SBC_1
0.7198
p.G1957D
DO38159
SKCM
ICGC
PESTT
DEG_SPOP_SBC_1
0.7198
p.R1959W
YT
haematopoietic_and_lymphoid_tissue
COSMIC
PESTT
DEG_SPOP_SBC_1
0.8634
p.R1959W
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
PESTT
DEG_SPOP_SBC_1
0.8634
Drug responses associated with TACC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95359
Transforming acidic coiled-coil-containing protein 2
DEG_SPOP_SBC_1
1956:1960
PESTT
SPOP
0.9713
More...
P15336
Cyclic AMP-dependent transcription factor ATF-2
DEG_SPOP_SBC_1
141:145
PESTT
SPOP
0.838
More...
Q13303
Voltage-gated potassium channel subunit beta-2
DEG_SPOP_SBC_1
3:7
PESTT
SPOP
0.9349
More...
Q14242
P-selectin glycoprotein ligand 1
DEG_SPOP_SBC_1
78:82
PESTT
SPOP
0.9598
More...
Q14687
Genetic suppressor element 1
DEG_SPOP_SBC_1
542:546
PESTT
SPOP
0.997
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
201:205
PESTT
SPOP
0.638
More...
Q70CQ4
Ubiquitin carboxyl-terminal hydrolase 31
DEG_SPOP_SBC_1
1019:1023
PESTT
SPOP
0.9963
More...
Q9P1Z2
Calcium-binding and coiled-coil domain-containing protein 1
DEG_SPOP_SBC_1
70:74
PESTT
SPOP
0.6507
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
1104:1108
PESTT
SPOP
0.985
More...