DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PESTT
Uniprot ID:
Q13303
Source protein:
Voltage-gated potassium channel subunit beta-2
Source gene:
KCNAB2
Class:
DEG_SPOP_SBC_1
Location:
3:7
E3 ligase:
SPOP
DEGRON score:
0.9349
ASA_SCORE:
85.52
COIL:
0.913
CONS_SCORE:
0.3292
DSS_SCORE:
0.8304
HELIX:
0.052
FCONS_SCORE:
0.9953
RIG_SCORE:
0.671
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R11W
TCGA-AP-A1DV
UCEC
TCGA
PESTT
DEG_SPOP_SBC_1
0.2222
p.R11W
DO43186
UCEC
ICGC
PESTT
DEG_SPOP_SBC_1
0.2222
p.S7C
TCGA-R6-A6XG
ESCA
TCGA
PESTT
DEG_SPOP_SBC_1
0.7541
p.R16W
DO227948
BRCA
ICGC
PESTT
DEG_SPOP_SBC_1
0.0833
p.R16W
DO23942
LUAD
ICGC
PESTT
DEG_SPOP_SBC_1
0.0833
p.R16W
DO42713
UCEC
ICGC
PESTT
DEG_SPOP_SBC_1
0.0833
p.R16W
SIDM00568
Gastric Carcinoma
GDSC
PESTT
DEG_SPOP_SBC_1
0.0833
p.R16W
SIDM00556
Neuroblastoma
GDSC
PESTT
DEG_SPOP_SBC_1
0.0833
p.R16W
SIDM00817
Kidney Carcinoma
GDSC
PESTT
DEG_SPOP_SBC_1
0.0833
p.R16W
ACH-000227
Neuroblastoma
CCLE
PESTT
DEG_SPOP_SBC_1
0.0833
p.R16W
ACH-000247
Gastric Cancer
CCLE
PESTT
DEG_SPOP_SBC_1
0.0833
p.R16W
KP-N-YN
autonomic_ganglia
COSMIC
PESTT
DEG_SPOP_SBC_1
0.0833
p.R16W
OCUM-1
stomach
COSMIC
PESTT
DEG_SPOP_SBC_1
0.0833
p.S14L
DO233636
GACA
ICGC
PESTT
DEG_SPOP_SBC_1
0.5833
p.R12Q
DO35613
PBCA
ICGC
PESTT
DEG_SPOP_SBC_1
0.1944
p.R12Q
DO38479
STAD
ICGC
PESTT
DEG_SPOP_SBC_1
0.1944
p.R11Q
DO230690
PRAD
ICGC
PESTT
DEG_SPOP_SBC_1
0.2222
p.R12W
SIDM02059
Colorectal Carcinoma
GDSC
PESTT
DEG_SPOP_SBC_1
0.1944
p.T7M
SIDM00217
Colorectal Carcinoma
GDSC
PESTT
DEG_SPOP_SBC_1
0.8534
p.T7M
ACH-000999
Colon/Colorectal Cancer
CCLE
PESTT
DEG_SPOP_SBC_1
0.8534
p.T7M
SNU-1040
large_intestine
COSMIC
PESTT
DEG_SPOP_SBC_1
0.8534
p.I14M
5637
urinary_tract
COSMIC
PESTT
DEG_SPOP_SBC_1
0.5833
Drug responses associated with KCNAB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PESTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95359
Transforming acidic coiled-coil-containing protein 2
DEG_SPOP_SBC_1
1956:1960
PESTT
SPOP
0.9713
More...
P15336
Cyclic AMP-dependent transcription factor ATF-2
DEG_SPOP_SBC_1
141:145
PESTT
SPOP
0.838
More...
Q13303
Voltage-gated potassium channel subunit beta-2
DEG_SPOP_SBC_1
3:7
PESTT
SPOP
0.9349
More...
Q14242
P-selectin glycoprotein ligand 1
DEG_SPOP_SBC_1
78:82
PESTT
SPOP
0.9598
More...
Q14687
Genetic suppressor element 1
DEG_SPOP_SBC_1
542:546
PESTT
SPOP
0.997
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
201:205
PESTT
SPOP
0.638
More...
Q70CQ4
Ubiquitin carboxyl-terminal hydrolase 31
DEG_SPOP_SBC_1
1019:1023
PESTT
SPOP
0.9963
More...
Q9P1Z2
Calcium-binding and coiled-coil domain-containing protein 1
DEG_SPOP_SBC_1
70:74
PESTT
SPOP
0.6507
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
1104:1108
PESTT
SPOP
0.985
More...