DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PLTTT
Uniprot ID:
O95206
Source protein:
Protocadherin-8
Source gene:
PCDH8
Class:
DEG_SPOP_SBC_1
Location:
699:703
E3 ligase:
SPOP
DEGRON score:
0.9524
ASA_SCORE:
55.14
COIL:
0.4112
CONS_SCORE:
0.4204
DSS_SCORE:
0.3858
HELIX:
0.0102
FCONS_SCORE:
0.8501
RIG_SCORE:
0.748
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R697H
TCGA-56-7822
LUSC
TCGA
PLTTT
DEG_SPOP_SBC_1
0.2778
p.R697H
DO26638
LUSC
ICGC
PLTTT
DEG_SPOP_SBC_1
0.2778
p.A704T
TCGA-IB-7651
PAAD
TCGA
PLTTT
DEG_SPOP_SBC_1
0.3056
p.A704T
DO46657
PAAD
ICGC
PLTTT
DEG_SPOP_SBC_1
0.3056
p.D694A
DO48437
BLCA
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1944
p.R697G
SIDM00633
Breast Carcinoma
GDSC
PLTTT
DEG_SPOP_SBC_1
0.2778
p.G695S
SIDM00529
Breast Carcinoma
GDSC
PLTTT
DEG_SPOP_SBC_1
0.2222
p.V709M
SIDM01779
Gastric Carcinoma
GDSC
PLTTT
DEG_SPOP_SBC_1
0.1667
p.V709M
ACH-000761
Gastric Cancer
CCLE
PLTTT
DEG_SPOP_SBC_1
0.1667
p.T703N
ACH-000248
Breast Cancer
CCLE
PLTTT
DEG_SPOP_SBC_1
0.7055
p.S707T
ACH-000617
Ovarian Cancer
CCLE
PLTTT
DEG_SPOP_SBC_1
0.2222
Drug responses associated with PCDH8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95206
Protocadherin-8
DEG_SPOP_SBC_1
699:703
PLTTT
SPOP
0.9524
More...
P08575
Receptor-type tyrosine-protein phosphatase C
DEG_SPOP_SBC_1
165:169
PLTTT
SPOP
0.9751
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1755:1759
PLTTT
SPOP
0.8841
More...
Q14684
Ribosomal RNA processing protein 1 homolog B
DEG_SPOP_SBC_1
743:747
PLTTT
SPOP
0.9993
More...
Q53H47
Histone-lysine N-methyltransferase SETMAR
DEG_SPOP_SBC_1
425:429
PLTTT
SPOP
0.5678
More...
Q8IVB4
Sodium/hydrogen exchanger 9
DEG_SPOP_SBC_1
547:551
PLTTT
SPOP
0.5232
More...
Q8ND30
Liprin-beta-2
DEG_SPOP_SBC_1
804:808
PLTTT
SPOP
0.9988
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8776:8780
PLTTT
SPOP
0.9519
More...
Q9HCM2
Plexin-A4
DEG_SPOP_SBC_1
107:111
PLTTT
SPOP
0.514
More...