DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PLTTT
Uniprot ID:
Q8IVB4
Source protein:
Sodium/hydrogen exchanger 9
Source gene:
SLC9A9
Class:
DEG_SPOP_SBC_1
Location:
547:551
E3 ligase:
SPOP
DEGRON score:
0.5232
ASA_SCORE:
77.06
COIL:
0.805
CONS_SCORE:
0.3334
DSS_SCORE:
0.3042
HELIX:
0.125
FCONS_SCORE:
0.9247
RIG_SCORE:
0.7397
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S544Y
TCGA-AA-A010
COAD
TCGA
PLTTT
DEG_SPOP_SBC_1
0.25
p.H543N
TCGA-B0-5096
KIRC
TCGA
PLTTT
DEG_SPOP_SBC_1
0.2222
p.H543N
DO19218
KIRC
ICGC
PLTTT
DEG_SPOP_SBC_1
0.2222
p.T550A
TCGA-CG-5721
STAD
TCGA
PLTTT
DEG_SPOP_SBC_1
0.7139
p.T550A
DO38192
STAD
ICGC
PLTTT
DEG_SPOP_SBC_1
0.7139
p.P558L
TCGA-CV-7261
HNSC
TCGA
PLTTT
DEG_SPOP_SBC_1
0.1389
p.P558L
TCGA-D3-A8GI
SKCM
TCGA
PLTTT
DEG_SPOP_SBC_1
0.1389
p.P558L
TCGA-DF-A2KU
UCEC
TCGA
PLTTT
DEG_SPOP_SBC_1
0.1389
p.P558L
DO15062
HNSC
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1389
p.P558L
DO50284
SKCM
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1389
p.P558L
DO223286
UCEC
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1389
p.P558L
ACH-001075
Lung Cancer
CCLE
PLTTT
DEG_SPOP_SBC_1
0.1389
p.P558L
NCI-H292
lung
COSMIC
PLTTT
DEG_SPOP_SBC_1
0.1389
p.S560F
DO233272
GACA
ICGC
PLTTT
DEG_SPOP_SBC_1
0.0833
p.T551K
DO229025
LICA
ICGC
PLTTT
DEG_SPOP_SBC_1
0.7306
p.I540V
SIDM00875
Breast Carcinoma
GDSC
PLTTT
DEG_SPOP_SBC_1
0.1389
p.I540V
SIDM01605
Non-Small Cell Lung Carcinoma
GDSC
PLTTT
DEG_SPOP_SBC_1
0.1389
Drug responses associated with SLC9A9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95206
Protocadherin-8
DEG_SPOP_SBC_1
699:703
PLTTT
SPOP
0.9524
More...
P08575
Receptor-type tyrosine-protein phosphatase C
DEG_SPOP_SBC_1
165:169
PLTTT
SPOP
0.9751
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1755:1759
PLTTT
SPOP
0.8841
More...
Q14684
Ribosomal RNA processing protein 1 homolog B
DEG_SPOP_SBC_1
743:747
PLTTT
SPOP
0.9993
More...
Q53H47
Histone-lysine N-methyltransferase SETMAR
DEG_SPOP_SBC_1
425:429
PLTTT
SPOP
0.5678
More...
Q8IVB4
Sodium/hydrogen exchanger 9
DEG_SPOP_SBC_1
547:551
PLTTT
SPOP
0.5232
More...
Q8ND30
Liprin-beta-2
DEG_SPOP_SBC_1
804:808
PLTTT
SPOP
0.9988
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8776:8780
PLTTT
SPOP
0.9519
More...
Q9HCM2
Plexin-A4
DEG_SPOP_SBC_1
107:111
PLTTT
SPOP
0.514
More...