DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTTT
Uniprot ID:
Q9HCM2
Source protein:
Plexin-A4
Source gene:
PLXNA4
Class:
DEG_SPOP_SBC_1
Location:
107:111
E3 ligase:
SPOP
DEGRON score:
0.514
ASA_SCORE:
76.96
COIL:
0.7658
CONS_SCORE:
0.4659
DSS_SCORE:
0.274
HELIX:
0.0222
FCONS_SCORE:
0.9764
RIG_SCORE:
0.8046
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L119V
TCGA-44-5644
LUAD
TCGA
PLTTT
DEG_SPOP_SBC_1
0.1111
p.L119V
DO25153
LUAD
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1111
p.R99S
TCGA-66-2769
LUSC
TCGA
PLTTT
DEG_SPOP_SBC_1
0.1111
p.R99S
DO26522
LUSC
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1111
p.R99L
TCGA-86-8358
LUAD
TCGA
PLTTT
DEG_SPOP_SBC_1
0.1111
p.R99L
DO25471
LUAD
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1111
p.V101I
TCGA-AX-A06F
UCEC
TCGA
PLTTT
DEG_SPOP_SBC_1
0.1667
p.V101I
DO229016
COCA
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1667
p.V101I
DO41752
UCEC
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1667
p.N112S
TCGA-B5-A0JY
UCEC
TCGA
PLTTT
DEG_SPOP_SBC_1
0.3056
p.N112S
DO43041
UCEC
ICGC
PLTTT
DEG_SPOP_SBC_1
0.3056
p.N115D
TCGA-DI-A1BU
UCEC
TCGA
PLTTT
DEG_SPOP_SBC_1
0.2222
p.N115D
DO42023
UCEC
ICGC
PLTTT
DEG_SPOP_SBC_1
0.2222
p.L119I
TCGA-EE-A2MJ
SKCM
TCGA
PLTTT
DEG_SPOP_SBC_1
0.1111
p.L119I
DO38099
SKCM
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1111
p.K116N
TCGA-IB-7651
PAAD
TCGA
PLTTT
DEG_SPOP_SBC_1
0.3056
p.K116N
DO46657
PAAD
ICGC
PLTTT
DEG_SPOP_SBC_1
0.3056
p.P97S
TCGA-YG-AA3N
SKCM
TCGA
PLTTT
DEG_SPOP_SBC_1
0.0556
p.P97S
DO51298
SKCM
ICGC
PLTTT
DEG_SPOP_SBC_1
0.0556
p.T111N
DO227872
COCA
ICGC
PLTTT
DEG_SPOP_SBC_1
0.7055
p.T111N
DO52491
COCA
ICGC
PLTTT
DEG_SPOP_SBC_1
0.7055
p.V114I
DO233764
GACA
ICGC
PLTTT
DEG_SPOP_SBC_1
0.25
p.R99H
DO228816
LICA
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1111
p.R99H
SIDM00951
T-Lymphoblastic Leukemia
GDSC
PLTTT
DEG_SPOP_SBC_1
0.1111
p.R99H
ACH-002222
Leukemia
CCLE
PLTTT
DEG_SPOP_SBC_1
0.1111
p.R99H
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PLTTT
DEG_SPOP_SBC_1
0.1111
p.N113S
SIDM01154
T-Lymphoblastic Leukemia
GDSC
PLTTT
DEG_SPOP_SBC_1
0.2778
p.N113S
ACH-000953
Leukemia
CCLE
PLTTT
DEG_SPOP_SBC_1
0.2778
p.N113S
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
PLTTT
DEG_SPOP_SBC_1
0.2778
p.Q102K
SIDM01612
Endometrial Carcinoma
GDSC
PLTTT
DEG_SPOP_SBC_1
0.1944
p.Q102K
ACH-000946
Endometrial/Uterine Cancer
CCLE
PLTTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with PLXNA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95206
Protocadherin-8
DEG_SPOP_SBC_1
699:703
PLTTT
SPOP
0.9524
More...
P08575
Receptor-type tyrosine-protein phosphatase C
DEG_SPOP_SBC_1
165:169
PLTTT
SPOP
0.9751
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1755:1759
PLTTT
SPOP
0.8841
More...
Q14684
Ribosomal RNA processing protein 1 homolog B
DEG_SPOP_SBC_1
743:747
PLTTT
SPOP
0.9993
More...
Q53H47
Histone-lysine N-methyltransferase SETMAR
DEG_SPOP_SBC_1
425:429
PLTTT
SPOP
0.5678
More...
Q8IVB4
Sodium/hydrogen exchanger 9
DEG_SPOP_SBC_1
547:551
PLTTT
SPOP
0.5232
More...
Q8ND30
Liprin-beta-2
DEG_SPOP_SBC_1
804:808
PLTTT
SPOP
0.9988
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8776:8780
PLTTT
SPOP
0.9519
More...
Q9HCM2
Plexin-A4
DEG_SPOP_SBC_1
107:111
PLTTT
SPOP
0.514
More...