DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PLTTT
Uniprot ID:
Q53H47
Source protein:
Histone-lysine N-methyltransferase SETMAR
Source gene:
SETMAR
Class:
DEG_SPOP_SBC_1
Location:
425:429
E3 ligase:
SPOP
DEGRON score:
0.5678
ASA_SCORE:
50.1
COIL:
0.6162
CONS_SCORE:
0.1793
DSS_SCORE:
0.4117
HELIX:
0.2876
FCONS_SCORE:
0.9958
RIG_SCORE:
0.7641
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D415Y
TCGA-44-4112
LUAD
TCGA
PLTTT
DEG_SPOP_SBC_1
0.0556
p.D415Y
DO26032
LUAD
ICGC
PLTTT
DEG_SPOP_SBC_1
0.0556
p.N437S
TCGA-FG-8186
LGG
TCGA
PLTTT
DEG_SPOP_SBC_1
0.1111
p.N437S
DO22113
LGG
ICGC
PLTTT
DEG_SPOP_SBC_1
0.1111
p.R430G
DO229054
LICA
ICGC
PLTTT
DEG_SPOP_SBC_1
0.3056
Drug responses associated with SETMAR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95206
Protocadherin-8
DEG_SPOP_SBC_1
699:703
PLTTT
SPOP
0.9524
More...
P08575
Receptor-type tyrosine-protein phosphatase C
DEG_SPOP_SBC_1
165:169
PLTTT
SPOP
0.9751
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1755:1759
PLTTT
SPOP
0.8841
More...
Q14684
Ribosomal RNA processing protein 1 homolog B
DEG_SPOP_SBC_1
743:747
PLTTT
SPOP
0.9993
More...
Q53H47
Histone-lysine N-methyltransferase SETMAR
DEG_SPOP_SBC_1
425:429
PLTTT
SPOP
0.5678
More...
Q8IVB4
Sodium/hydrogen exchanger 9
DEG_SPOP_SBC_1
547:551
PLTTT
SPOP
0.5232
More...
Q8ND30
Liprin-beta-2
DEG_SPOP_SBC_1
804:808
PLTTT
SPOP
0.9988
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8776:8780
PLTTT
SPOP
0.9519
More...
Q9HCM2
Plexin-A4
DEG_SPOP_SBC_1
107:111
PLTTT
SPOP
0.514
More...