DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PLTTT
Uniprot ID:
Q8ND30
Source protein:
Liprin-beta-2
Source gene:
PPFIBP2
Class:
DEG_SPOP_SBC_1
Location:
804:808
E3 ligase:
SPOP
DEGRON score:
0.9988
ASA_SCORE:
61.28
COIL:
0.8578
CONS_SCORE:
0.5549
DSS_SCORE:
0.5058
HELIX:
0.071
FCONS_SCORE:
0.9675
RIG_SCORE:
0.7623
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P804Q
TCGA-DU-6392
LGG
TCGA
PLTTT
DEG_SPOP_SBC_1
0.7035
p.E795Q
TCGA-NK-A5CR
LUSC
TCGA
PLTTT
DEG_SPOP_SBC_1
0.0833
p.R812Q
SIDM00473
Oral Cavity Carcinoma
GDSC
PLTTT
DEG_SPOP_SBC_1
0.2222
p.A798S
SIDM01574
Plasma Cell Myeloma
GDSC
PLTTT
DEG_SPOP_SBC_1
0.1667
p.A798S
SIDM01391
Neuroblastoma
GDSC
PLTTT
DEG_SPOP_SBC_1
0.1667
Drug responses associated with PPFIBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95206
Protocadherin-8
DEG_SPOP_SBC_1
699:703
PLTTT
SPOP
0.9524
More...
P08575
Receptor-type tyrosine-protein phosphatase C
DEG_SPOP_SBC_1
165:169
PLTTT
SPOP
0.9751
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1755:1759
PLTTT
SPOP
0.8841
More...
Q14684
Ribosomal RNA processing protein 1 homolog B
DEG_SPOP_SBC_1
743:747
PLTTT
SPOP
0.9993
More...
Q53H47
Histone-lysine N-methyltransferase SETMAR
DEG_SPOP_SBC_1
425:429
PLTTT
SPOP
0.5678
More...
Q8IVB4
Sodium/hydrogen exchanger 9
DEG_SPOP_SBC_1
547:551
PLTTT
SPOP
0.5232
More...
Q8ND30
Liprin-beta-2
DEG_SPOP_SBC_1
804:808
PLTTT
SPOP
0.9988
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8776:8780
PLTTT
SPOP
0.9519
More...
Q9HCM2
Plexin-A4
DEG_SPOP_SBC_1
107:111
PLTTT
SPOP
0.514
More...