DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PNTTS
Uniprot ID:
O00592
Source protein:
Podocalyxin
Source gene:
PODXL
Class:
DEG_SPOP_SBC_1
Location:
143:147
E3 ligase:
SPOP
DEGRON score:
0.8566
ASA_SCORE:
88.92
COIL:
0.9134
CONS_SCORE:
0.3795
DSS_SCORE:
0.6484
HELIX:
0.0262
FCONS_SCORE:
1.0438
RIG_SCORE:
0.6431
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D154Y
TCGA-A5-A1OF
UCEC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.1389
p.A141D
DO229028
LICA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.D156Y
DO42568
UCEC
ICGC
PNTTS
DEG_SPOP_SBC_1
0.0833
p.D154N
ACH-000543
Brain Cancer
CCLE
PNTTS
DEG_SPOP_SBC_1
0.1389
p.N157S
ACH-000850
Non-Cancerous
CCLE
PNTTS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with PODXL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
143:147
PNTTS
SPOP
0.8566
More...
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
432:436
PNTTS
SPOP
0.9996
More...
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
961:965
PNTTS
SPOP
0.9965
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1144:1148
PNTTS
SPOP
0.9567
More...
Q86UP3
Zinc finger homeobox protein 4
DEG_SPOP_SBC_1
3450:3454
PNTTS
SPOP
0.7986
More...
Q8TF74
WAS/WASL-interacting protein family member 2
DEG_SPOP_SBC_1
162:166
PNTTS
SPOP
0.9644
More...
Q9UPV9
Trafficking kinesin-binding protein 1
DEG_SPOP_SBC_1
356:360
PNTTS
SPOP
0.9623
More...
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
DEG_SPOP_SBC_1
2442:2446
PNTTS
SPOP
0.6504
More...
Q9Y6X4
Soluble lamin-associated protein of 75 kDa
DEG_SPOP_SBC_1
562:566
PNTTS
SPOP
0.5576
More...