DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PNTTS
Uniprot ID:
Q86UP3
Source protein:
Zinc finger homeobox protein 4
Source gene:
ZFHX4
Class:
DEG_SPOP_SBC_1
Location:
3450:3454
E3 ligase:
SPOP
DEGRON score:
0.7986
ASA_SCORE:
89.2
COIL:
0.9358
CONS_SCORE:
0.2829
DSS_SCORE:
0.5666
HELIX:
0.0392
FCONS_SCORE:
0.966
RIG_SCORE:
0.5909
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L3450I
TCGA-44-5644
LUAD
TCGA
PNTTS
DEG_SPOP_SBC_1
0.7174
p.L3450I
TCGA-AP-A0LM
UCEC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.7174
p.A3455D
TCGA-A5-A0G1
UCEC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.3056
p.P3443S
TCGA-EE-A2GB
SKCM
TCGA
PNTTS
DEG_SPOP_SBC_1
0.1389
p.G3458W
TCGA-GN-A26C
SKCM
TCGA
PNTTS
DEG_SPOP_SBC_1
0.2222
p.P3443A
TCGA-O2-A52N
LUSC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.1389
p.S3456L
DO222884
COCA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.S3456L
DO228142
PBCA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.S3456L
DO50075
UCEC
ICGC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.N3463S
DO228631
GACA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.0833
p.S3447T
DO27247
LUSC
ICGC
PNTTS
DEG_SPOP_SBC_1
0.25
p.N3449S
DO222363
MELA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.3056
p.S3444L
DO222714
MELA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.1667
p.P3450H
DO39886
THCA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.7694
p.L3450F
SIDM00216
Colorectal Carcinoma
GDSC
PNTTS
DEG_SPOP_SBC_1
0.6981
p.L3450F
ACH-000989
Colon/Colorectal Cancer
CCLE
PNTTS
DEG_SPOP_SBC_1
0.6981
p.L3450F
SNU-175
large_intestine
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.6981
p.I3456L
SIDM00845
Burkitt's Lymphoma
GDSC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.G3458R
SIDM00990
Non-Small Cell Lung Carcinoma
GDSC
PNTTS
DEG_SPOP_SBC_1
0.2222
p.C3449G
SIDM00217
Colorectal Carcinoma
GDSC
PNTTS
DEG_SPOP_SBC_1
0.3056
p.C3449G
ACH-000999
Colon/Colorectal Cancer
CCLE
PNTTS
DEG_SPOP_SBC_1
0.3056
p.C3449G
SNU-1040
large_intestine
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.3056
p.L3462R
ACH-000436
Myeloma
CCLE
PNTTS
DEG_SPOP_SBC_1
0.1111
p.E3459K
EVSA-T
breast
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.1944
p.A3457G
NUGC-3
stomach
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with ZFHX4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
143:147
PNTTS
SPOP
0.8566
More...
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
432:436
PNTTS
SPOP
0.9996
More...
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
961:965
PNTTS
SPOP
0.9965
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1144:1148
PNTTS
SPOP
0.9567
More...
Q86UP3
Zinc finger homeobox protein 4
DEG_SPOP_SBC_1
3450:3454
PNTTS
SPOP
0.7986
More...
Q8TF74
WAS/WASL-interacting protein family member 2
DEG_SPOP_SBC_1
162:166
PNTTS
SPOP
0.9644
More...
Q9UPV9
Trafficking kinesin-binding protein 1
DEG_SPOP_SBC_1
356:360
PNTTS
SPOP
0.9623
More...
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
DEG_SPOP_SBC_1
2442:2446
PNTTS
SPOP
0.6504
More...
Q9Y6X4
Soluble lamin-associated protein of 75 kDa
DEG_SPOP_SBC_1
562:566
PNTTS
SPOP
0.5576
More...