DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PNTTS
Uniprot ID:
Q8TF74
Source protein:
WAS/WASL-interacting protein family member 2
Source gene:
WIPF2
Class:
DEG_SPOP_SBC_1
Location:
162:166
E3 ligase:
SPOP
DEGRON score:
0.9644
ASA_SCORE:
86.88
COIL:
0.964
CONS_SCORE:
0.4606
DSS_SCORE:
0.8471
HELIX:
0.0196
FCONS_SCORE:
0.6907
RIG_SCORE:
0.5119
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T168M
TCGA-3M-AB47
STAD
TCGA
PNTTS
DEG_SPOP_SBC_1
0.2778
p.T168M
TCGA-BP-5198
KIRC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.2778
p.T168M
DO19128
KIRC
ICGC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.T168M
DO222327
STAD
ICGC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.R161Q
TCGA-66-2769
LUSC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.3056
p.R161Q
DO26522
LUSC
ICGC
PNTTS
DEG_SPOP_SBC_1
0.3056
p.S174C
TCGA-DH-A7UT
LGG
TCGA
PNTTS
DEG_SPOP_SBC_1
0.5556
p.S174C
DO222830
BTCA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.5556
p.S174C
DO51811
LGG
ICGC
PNTTS
DEG_SPOP_SBC_1
0.5556
p.S166N
TCGA-DU-6392
LGG
TCGA
PNTTS
DEG_SPOP_SBC_1
0.7069
p.S166N
DO22237
LGG
ICGC
PNTTS
DEG_SPOP_SBC_1
0.7069
p.G169C
TCGA-EE-A3AA
SKCM
TCGA
PNTTS
DEG_SPOP_SBC_1
0.25
p.G169C
DO37571
SKCM
ICGC
PNTTS
DEG_SPOP_SBC_1
0.25
p.S175F
TCGA-ZF-AA4X
BLCA
TCGA
PNTTS
DEG_SPOP_SBC_1
0.5278
p.S175F
DO219091
BLCA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.5278
p.S173G
DO49342
ALL
ICGC
PNTTS
DEG_SPOP_SBC_1
0.1389
p.R172S
DO8642
COAD
ICGC
PNTTS
DEG_SPOP_SBC_1
0.1667
p.R161S
DO52462
COCA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.3056
p.M170T
DO233865
GACA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.2222
p.S173I
DO233903
GACA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.1389
p.R169L
DO232761
PBCA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.25
p.R172H
EW-11
bone
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.1667
p.P176H
CCK-81
large_intestine
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with WIPF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
143:147
PNTTS
SPOP
0.8566
More...
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
432:436
PNTTS
SPOP
0.9996
More...
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
961:965
PNTTS
SPOP
0.9965
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1144:1148
PNTTS
SPOP
0.9567
More...
Q86UP3
Zinc finger homeobox protein 4
DEG_SPOP_SBC_1
3450:3454
PNTTS
SPOP
0.7986
More...
Q8TF74
WAS/WASL-interacting protein family member 2
DEG_SPOP_SBC_1
162:166
PNTTS
SPOP
0.9644
More...
Q9UPV9
Trafficking kinesin-binding protein 1
DEG_SPOP_SBC_1
356:360
PNTTS
SPOP
0.9623
More...
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
DEG_SPOP_SBC_1
2442:2446
PNTTS
SPOP
0.6504
More...
Q9Y6X4
Soluble lamin-associated protein of 75 kDa
DEG_SPOP_SBC_1
562:566
PNTTS
SPOP
0.5576
More...