DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PNTTS
Uniprot ID:
Q9UPV9
Source protein:
Trafficking kinesin-binding protein 1
Source gene:
TRAK1
Class:
DEG_SPOP_SBC_1
Location:
356:360
E3 ligase:
SPOP
DEGRON score:
0.9623
ASA_SCORE:
79.32
COIL:
0.8844
CONS_SCORE:
0.3705
DSS_SCORE:
0.4778
HELIX:
0.0734
FCONS_SCORE:
0.842
RIG_SCORE:
0.6844
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M355I
TCGA-G3-AAV7
LIHC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.3056
p.S361G
PCI-30
upper_aerodigestive_tract
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.3056
p.R362C
TCGA-IB-7651
PAAD
TCGA
PNTTS
DEG_SPOP_SBC_1
0.2778
p.R362C
SIDM01169
Ovarian Carcinoma
GDSC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.R362C
SIDM00216
Colorectal Carcinoma
GDSC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.R362C
TOV-21G
ovary
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.R362C
SNU-175
large_intestine
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.R362H
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.R362H
NCI-H650
lung
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.V354I
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.I362V
U-2-OS
bone
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.S363Y
DO42793
UCEC
ICGC
PNTTS
DEG_SPOP_SBC_1
0.25
p.H364N
TCGA-EE-A29E
SKCM
TCGA
PNTTS
DEG_SPOP_SBC_1
0.2222
p.M365V
DO14470
HNSC
ICGC
PNTTS
DEG_SPOP_SBC_1
0.1944
p.I350M
P31-FUJ
haematopoietic_and_lymphoid_tissue
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.1667
p.V368F
ACH-001820
Breast Cancer
CCLE
PNTTS
DEG_SPOP_SBC_1
0.1111
p.V368F
COLO-824
breast
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.1111
p.A368V
HEC-1
endometrium
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.1111
p.L347P
SIDM01147
Gastric Carcinoma
GDSC
PNTTS
DEG_SPOP_SBC_1
0.0833
p.L347P
NCI-N87
stomach
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.0833
p.G347C
LIM1215
large_intestine
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.0833
p.P370S
TCGA-QS-A8F1
UCEC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.0556
Showing 1 to 22 of 22 entries
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Drug responses associated with TRAK1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PNTTS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
DEG_SPOP_SBC_1
2442:2446
PNTTS
SPOP
0.6504
More...
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
961:965
PNTTS
SPOP
0.9965
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1144:1148
PNTTS
SPOP
0.9567
More...
O00592
Podocalyxin
DEG_SPOP_SBC_1
143:147
PNTTS
SPOP
0.8566
More...
Q9Y6X4
Soluble lamin-associated protein of 75 kDa
DEG_SPOP_SBC_1
562:566
PNTTS
SPOP
0.5576
More...
Q9UPV9
Trafficking kinesin-binding protein 1
DEG_SPOP_SBC_1
356:360
PNTTS
SPOP
0.9623
More...
Q8TF74
WAS/WASL-interacting protein family member 2
DEG_SPOP_SBC_1
162:166
PNTTS
SPOP
0.9644
More...
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
432:436
PNTTS
SPOP
0.9996
More...
Q86UP3
Zinc finger homeobox protein 4
DEG_SPOP_SBC_1
3450:3454
PNTTS
SPOP
0.7986
More...
Showing 1 to 9 of 9 entries
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