DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PNTTS
Uniprot ID:
Q8NDH2
Source protein:
Leucine-rich repeat transmembrane protein CCDC168
Source gene:
CCDC168
Class:
DEG_SPOP_SBC_1
Location:
2442:2446
E3 ligase:
SPOP
DEGRON score:
0.6504
ASA_SCORE:
55.96
COIL:
0.5906
CONS_SCORE:
0.4473
DSS_SCORE:
0.5395
HELIX:
0.0996
FCONS_SCORE:
0.8396
RIG_SCORE:
0.708
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2443L
TCGA-A5-A0G1
UCEC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.7667
p.S2443L
DO233752
GACA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.7667
p.S2443L
DO42472
UCEC
ICGC
PNTTS
DEG_SPOP_SBC_1
0.7667
p.W2432C
TCGA-B5-A3FA
UCEC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.0556
p.W2432C
DO52402
UCEC
ICGC
PNTTS
DEG_SPOP_SBC_1
0.0556
p.G2440E
DO7148
CLLE
ICGC
PNTTS
DEG_SPOP_SBC_1
0.2778
p.L2442I
DO228974
LICA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.7174
Drug responses associated with CCDC168 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
143:147
PNTTS
SPOP
0.8566
More...
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
432:436
PNTTS
SPOP
0.9996
More...
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
961:965
PNTTS
SPOP
0.9965
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1144:1148
PNTTS
SPOP
0.9567
More...
Q86UP3
Zinc finger homeobox protein 4
DEG_SPOP_SBC_1
3450:3454
PNTTS
SPOP
0.7986
More...
Q8TF74
WAS/WASL-interacting protein family member 2
DEG_SPOP_SBC_1
162:166
PNTTS
SPOP
0.9644
More...
Q9UPV9
Trafficking kinesin-binding protein 1
DEG_SPOP_SBC_1
356:360
PNTTS
SPOP
0.9623
More...
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
DEG_SPOP_SBC_1
2442:2446
PNTTS
SPOP
0.6504
More...
Q9Y6X4
Soluble lamin-associated protein of 75 kDa
DEG_SPOP_SBC_1
562:566
PNTTS
SPOP
0.5576
More...