DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PNTTS
Uniprot ID:
Q9Y6X4
Source protein:
Soluble lamin-associated protein of 75 kDa
Source gene:
FAM169A
Class:
DEG_SPOP_SBC_1
Location:
562:566
E3 ligase:
SPOP
DEGRON score:
0.5576
ASA_SCORE:
92.96
COIL:
0.9382
CONS_SCORE:
0.3977
DSS_SCORE:
0.7961
HELIX:
0.0316
FCONS_SCORE:
0.9096
RIG_SCORE:
0.614
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S561F
TCGA-2W-A8YY
CESC
TCGA
PNTTS
DEG_SPOP_SBC_1
0.3056
p.S552P
TCGA-WE-A8K6
SKCM
TCGA
PNTTS
DEG_SPOP_SBC_1
0.0556
p.D574Y
DO449
BLCA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.1111
p.S558C
DO755
BLCA
ICGC
PNTTS
DEG_SPOP_SBC_1
0.2222
p.S559C
DO46394
OV
ICGC
PNTTS
DEG_SPOP_SBC_1
0.25
p.D570Y
SIDM00282
Colorectal Carcinoma
GDSC
PNTTS
DEG_SPOP_SBC_1
0.2222
p.D570Y
CW-2
large_intestine
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.2222
p.A569V
ACH-000999
Colon/Colorectal Cancer
CCLE
PNTTS
DEG_SPOP_SBC_1
0.25
p.A569V
SNU-1040
large_intestine
COSMIC
PNTTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with FAM169A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
143:147
PNTTS
SPOP
0.8566
More...
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
432:436
PNTTS
SPOP
0.9996
More...
O75151
Lysine-specific demethylase PHF2
DEG_SPOP_SBC_1
961:965
PNTTS
SPOP
0.9965
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1144:1148
PNTTS
SPOP
0.9567
More...
Q86UP3
Zinc finger homeobox protein 4
DEG_SPOP_SBC_1
3450:3454
PNTTS
SPOP
0.7986
More...
Q8TF74
WAS/WASL-interacting protein family member 2
DEG_SPOP_SBC_1
162:166
PNTTS
SPOP
0.9644
More...
Q9UPV9
Trafficking kinesin-binding protein 1
DEG_SPOP_SBC_1
356:360
PNTTS
SPOP
0.9623
More...
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
DEG_SPOP_SBC_1
2442:2446
PNTTS
SPOP
0.6504
More...
Q9Y6X4
Soluble lamin-associated protein of 75 kDa
DEG_SPOP_SBC_1
562:566
PNTTS
SPOP
0.5576
More...