DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPCY
Uniprot ID:
Q8N4L1
Source protein:
Transmembrane protein 151A
Source gene:
TMEM151A
Class:
ITCH
Location:
440:443
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9955
ASA_SCORE:
52.425
COIL:
0.764
CONS_SCORE:
0.7916
DSS_SCORE:
0.4379
HELIX:
0.1803
FCONS_SCORE:
1.6383
RIG_SCORE:
0.7789
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y443F
TCGA-69-7979
LUAD
TCGA
PPCY
ITCH
0.8639
p.Y443F
DO23874
LUAD
ICGC
PPCY
ITCH
0.8639
p.T434M
TCGA-VQ-A91D
STAD
TCGA
PPCY
ITCH
0.1667
p.T434M
DO51783
STAD
ICGC
PPCY
ITCH
0.1667
p.T434M
SIDM00336
Melanoma
GDSC
PPCY
ITCH
0.1667
p.I453V
DO233179
GACA
ICGC
PPCY
ITCH
0.0556
p.P440T
DO229259
THCA
ICGC
PPCY
ITCH
0.7031
p.R430S
DO229257
THCA
ICGC
PPCY
ITCH
0.0556
p.R430C
SIDM02072
Colorectal Carcinoma
GDSC
PPCY
ITCH
0.0556
p.E435D
SIDM01187
Breast Carcinoma
GDSC
PPCY
ITCH
0.1944
p.E435D
ACH-000568
Breast Cancer
CCLE
PPCY
ITCH
0.1944
p.E435D
UACC-812
breast
COSMIC
PPCY
ITCH
0.1944
Drug responses associated with TMEM151A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPCY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95996
Adenomatous polyposis coli protein 2
ITCH
1574:1577
PPCY
ITCH,NEDD4
0.9736
More...
P31785
Cytokine receptor common subunit gamma
ITCH
360:363
PPCY
ITCH,NEDD4
0.9947
More...
Q9GZS1
DNA-directed RNA polymerase I subunit RPA49
ITCH
201:204
PPCY
ITCH,NEDD4
0.994
More...
Q9H3M7
Thioredoxin-interacting protein
ITCH
331:334
PPCY
ITCH,NEDD4
0.9982
More...
Q9ULL8
Protein Shroom4
ITCH
1232:1235
PPCY
ITCH,NEDD4
0.9603
More...
Q8WV15
Transmembrane protein 255B
ITCH
307:310
PPCY
ITCH,NEDD4
0.9924
More...
Q9H425
Uncharacterized protein C1orf198
ITCH
226:229
PPCY
ITCH,NEDD4
0.9312
More...
Q8N4L1
Transmembrane protein 151A
ITCH
440:443
PPCY
ITCH,NEDD4
0.9955
More...