DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPCY
Uniprot ID:
Q8WV15
Source protein:
Transmembrane protein 255B
Source gene:
TMEM255B
Class:
ITCH
Location:
307:310
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.9924
ASA_SCORE:
71.55
COIL:
0.9265
CONS_SCORE:
0.2198
DSS_SCORE:
0.5875
HELIX:
0.015
FCONS_SCORE:
0.6062
RIG_SCORE:
0.6221
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P303L
TCGA-61-2101
OV
TCGA
PPCY
ITCH
0.2222
p.P303L
TCGA-DX-A8BP
SARC
TCGA
PPCY
ITCH
0.2222
p.P303L
DO28062
OV
ICGC
PPCY
ITCH
0.2222
p.P303L
DO220056
SARC
ICGC
PPCY
ITCH
0.2222
p.P316S
TCGA-BR-A4PF
STAD
TCGA
PPCY
ITCH
0.1667
p.P316S
DO228012
SKCA
ICGC
PPCY
ITCH
0.1667
p.P316S
DO38268
STAD
ICGC
PPCY
ITCH
0.1667
p.P316S
SIDM00166
Other Solid Cancers
GDSC
PPCY
ITCH
0.1667
p.P316S
ACH-000302
Endometrial/Uterine Cancer
CCLE
PPCY
ITCH
0.1667
p.F315L
TCGA-FT-A3EE
BLCA
TCGA
PPCY
ITCH
0.1944
p.F315L
DO720
BLCA
ICGC
PPCY
ITCH
0.1944
p.A306V
DO222852
BTCA
ICGC
PPCY
ITCH
0.3056
p.P317Q
DO35592
PBCA
ICGC
PPCY
ITCH
0.1389
p.A311T
DO232224
PBCA
ICGC
PPCY
ITCH
0.3056
p.P316L
SIDM00166
Other Solid Cancers
GDSC
PPCY
ITCH
0.1667
p.P316L
ACH-000302
Endometrial/Uterine Cancer
CCLE
PPCY
ITCH
0.1667
p.E319K
EVSA-T
breast
COSMIC
PPCY
ITCH
0.0833
p.E319K
SK-MEL-2
skin
COSMIC
PPCY
ITCH
0.0833
Drug responses associated with TMEM255B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPCY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95996
Adenomatous polyposis coli protein 2
ITCH
1574:1577
PPCY
ITCH,NEDD4
0.9736
More...
P31785
Cytokine receptor common subunit gamma
ITCH
360:363
PPCY
ITCH,NEDD4
0.9947
More...
Q9GZS1
DNA-directed RNA polymerase I subunit RPA49
ITCH
201:204
PPCY
ITCH,NEDD4
0.994
More...
Q9H3M7
Thioredoxin-interacting protein
ITCH
331:334
PPCY
ITCH,NEDD4
0.9982
More...
Q9ULL8
Protein Shroom4
ITCH
1232:1235
PPCY
ITCH,NEDD4
0.9603
More...
Q8WV15
Transmembrane protein 255B
ITCH
307:310
PPCY
ITCH,NEDD4
0.9924
More...
Q9H425
Uncharacterized protein C1orf198
ITCH
226:229
PPCY
ITCH,NEDD4
0.9312
More...
Q8N4L1
Transmembrane protein 151A
ITCH
440:443
PPCY
ITCH,NEDD4
0.9955
More...