DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PQSST
Uniprot ID:
Q93052
Source protein:
Lipoma-preferred partner
Source gene:
LPP
Class:
DEG_SPOP_SBC_1
Location:
142:146
E3 ligase:
SPOP
DEGRON score:
0.9235
ASA_SCORE:
93.72
COIL:
0.9508
CONS_SCORE:
0.328
DSS_SCORE:
0.7453
HELIX:
0.0288
FCONS_SCORE:
0.901
RIG_SCORE:
0.505
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E132D
TCGA-18-3417
LUSC
TCGA
PQSST
DEG_SPOP_SBC_1
0.0556
p.E132D
DO26584
LUSC
ICGC
PQSST
DEG_SPOP_SBC_1
0.0556
p.G147R
TCGA-85-7843
LUSC
TCGA
PQSST
DEG_SPOP_SBC_1
0.3056
p.G147R
DO26500
LUSC
ICGC
PQSST
DEG_SPOP_SBC_1
0.3056
p.S155L
TCGA-B5-A3FA
UCEC
TCGA
PQSST
DEG_SPOP_SBC_1
0.0833
p.S155L
DO52402
UCEC
ICGC
PQSST
DEG_SPOP_SBC_1
0.0833
p.S135Y
TCGA-BF-A5EQ
SKCM
TCGA
PQSST
DEG_SPOP_SBC_1
0.5833
p.S135Y
DO219452
SKCM
ICGC
PQSST
DEG_SPOP_SBC_1
0.5833
p.S151C
TCGA-PE-A5DE
BRCA
TCGA
PQSST
DEG_SPOP_SBC_1
0.6389
p.S151C
DO219643
BRCA
ICGC
PQSST
DEG_SPOP_SBC_1
0.6389
p.Y137C
TCGA-V1-A9Z7
PRAD
TCGA
PQSST
DEG_SPOP_SBC_1
0.1944
p.Y137C
DO219391
PRAD
ICGC
PQSST
DEG_SPOP_SBC_1
0.1944
p.C133F
DO228952
LICA
ICGC
PQSST
DEG_SPOP_SBC_1
0.0833
p.G147C
DO229038
LICA
ICGC
PQSST
DEG_SPOP_SBC_1
0.3056
p.P139H
DO49478
PACA
ICGC
PQSST
DEG_SPOP_SBC_1
0.25
p.P136S
SIDM00614
Hepatocellular Carcinoma
GDSC
PQSST
DEG_SPOP_SBC_1
0.1667
p.P136S
SIDM00581
Glioblastoma
GDSC
PQSST
DEG_SPOP_SBC_1
0.1667
p.P136S
GB-1
central_nervous_system
COSMIC
PQSST
DEG_SPOP_SBC_1
0.1667
p.P136S
JHH-7
liver
COSMIC
PQSST
DEG_SPOP_SBC_1
0.1667
p.S151P
SIDM01605
Non-Small Cell Lung Carcinoma
GDSC
PQSST
DEG_SPOP_SBC_1
0.6389
p.S148L
ACH-001982
Metastasis
CCLE
PQSST
DEG_SPOP_SBC_1
0.2778
p.T151R
CS1
bone
COSMIC
PQSST
DEG_SPOP_SBC_1
0.6389
Drug responses associated with LPP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14964
Hepatocyte growth factor-regulated tyrosine kinase substrate
DEG_SPOP_SBC_1
689:693
PQSST
SPOP
0.9823
More...
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
382:386
PQSST
SPOP
0.9983
More...
P08069
Insulin-like growth factor 1 receptor
DEG_SPOP_SBC_1
1362:1366
PQSST
SPOP
0.9661
More...
Q01844
RNA-binding protein EWS
DEG_SPOP_SBC_1
151:155
PQSST
SPOP
0.8757
More...
Q86XJ1
GAS2-like protein 3
DEG_SPOP_SBC_1
619:623
PQSST
SPOP
0.9841
More...
Q93052
Lipoma-preferred partner
DEG_SPOP_SBC_1
142:146
PQSST
SPOP
0.9235
More...
Q9UQR0
Sex comb on midleg-like protein 2
DEG_SPOP_SBC_1
21:25
PQSST
SPOP
0.9781
More...
P63132
Endogenous retrovirus group K member 113 Pol protein
DEG_SPOP_SBC_1
875:879
PQSST
SPOP
0.8663
More...
P63136
Endogenous retrovirus group K member 25 Pol protein
DEG_SPOP_SBC_1
873:877
PQSST
SPOP
0.5968
More...
Q9ULK2
Ataxin-7-like protein 1
DEG_SPOP_SBC_1
647:651
PQSST
SPOP
0.9761
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
129:133
PQSST
SPOP
0.9614
More...