DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PQSST
Uniprot ID:
Q9UQR0
Source protein:
Sex comb on midleg-like protein 2
Source gene:
SCML2
Class:
DEG_SPOP_SBC_1
Location:
21:25
E3 ligase:
SPOP
DEGRON score:
0.9781
ASA_SCORE:
83.64
COIL:
0.9354
CONS_SCORE:
0.6691
DSS_SCORE:
0.6862
HELIX:
0.0388
FCONS_SCORE:
0.9803
RIG_SCORE:
0.6153
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D31Y
TCGA-55-8508
LUAD
TCGA
PQSST
DEG_SPOP_SBC_1
0.1667
p.D31Y
DO45341
LUAD
ICGC
PQSST
DEG_SPOP_SBC_1
0.1667
p.V28I
TCGA-AN-A0AK
BRCA
TCGA
PQSST
DEG_SPOP_SBC_1
0.25
p.V28I
DO1608
BRCA
ICGC
PQSST
DEG_SPOP_SBC_1
0.25
p.D31H
TCGA-B0-5099
KIRC
TCGA
PQSST
DEG_SPOP_SBC_1
0.1667
p.D31H
DO16317
KIRC
ICGC
PQSST
DEG_SPOP_SBC_1
0.1667
p.Q22K
TCGA-CV-7091
HNSC
TCGA
PQSST
DEG_SPOP_SBC_1
0.5833
p.Q22K
DO14212
HNSC
ICGC
PQSST
DEG_SPOP_SBC_1
0.5833
p.Q22K
DO229045
LICA
ICGC
PQSST
DEG_SPOP_SBC_1
0.5833
p.D32N
TCGA-EE-A3JI
SKCM
TCGA
PQSST
DEG_SPOP_SBC_1
0.1389
p.D32N
DO47268
SKCM
ICGC
PQSST
DEG_SPOP_SBC_1
0.1389
p.S26Y
TCGA-EO-A3B0
UCEC
TCGA
PQSST
DEG_SPOP_SBC_1
0.3056
p.S26Y
DO219773
UCEC
ICGC
PQSST
DEG_SPOP_SBC_1
0.3056
p.S26F
TCGA-FR-A726
SKCM
TCGA
PQSST
DEG_SPOP_SBC_1
0.3056
p.S26F
DO48665
SKCM
ICGC
PQSST
DEG_SPOP_SBC_1
0.3056
p.F33L
DO229037
LICA
ICGC
PQSST
DEG_SPOP_SBC_1
0.1111
p.Q17K
SIDM00619
Thyroid Gland Carcinoma
GDSC
PQSST
DEG_SPOP_SBC_1
0.2222
p.Q17K
ACH-002397
Thyroid Cancer
CCLE
PQSST
DEG_SPOP_SBC_1
0.2222
p.Q17K
KMH-2
thyroid
COSMIC
PQSST
DEG_SPOP_SBC_1
0.2222
p.V12A
SIDM00217
Colorectal Carcinoma
GDSC
PQSST
DEG_SPOP_SBC_1
0.0833
p.V12A
ACH-000999
Colon/Colorectal Cancer
CCLE
PQSST
DEG_SPOP_SBC_1
0.0833
p.V12A
SNU-1040
large_intestine
COSMIC
PQSST
DEG_SPOP_SBC_1
0.0833
Drug responses associated with SCML2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14964
Hepatocyte growth factor-regulated tyrosine kinase substrate
DEG_SPOP_SBC_1
689:693
PQSST
SPOP
0.9823
More...
O15062
Zinc finger and BTB domain-containing protein 5
DEG_SPOP_SBC_1
382:386
PQSST
SPOP
0.9983
More...
P08069
Insulin-like growth factor 1 receptor
DEG_SPOP_SBC_1
1362:1366
PQSST
SPOP
0.9661
More...
Q01844
RNA-binding protein EWS
DEG_SPOP_SBC_1
151:155
PQSST
SPOP
0.8757
More...
Q86XJ1
GAS2-like protein 3
DEG_SPOP_SBC_1
619:623
PQSST
SPOP
0.9841
More...
Q93052
Lipoma-preferred partner
DEG_SPOP_SBC_1
142:146
PQSST
SPOP
0.9235
More...
Q9UQR0
Sex comb on midleg-like protein 2
DEG_SPOP_SBC_1
21:25
PQSST
SPOP
0.9781
More...
P63132
Endogenous retrovirus group K member 113 Pol protein
DEG_SPOP_SBC_1
875:879
PQSST
SPOP
0.8663
More...
P63136
Endogenous retrovirus group K member 25 Pol protein
DEG_SPOP_SBC_1
873:877
PQSST
SPOP
0.5968
More...
Q9ULK2
Ataxin-7-like protein 1
DEG_SPOP_SBC_1
647:651
PQSST
SPOP
0.9761
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
129:133
PQSST
SPOP
0.9614
More...