DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PQSTS
Uniprot ID:
Q13428
Source protein:
Treacle protein
Source gene:
TCOF1
Class:
DEG_SPOP_SBC_1
Location:
1112:1116
E3 ligase:
SPOP
DEGRON score:
0.9975
ASA_SCORE:
96.6
COIL:
0.9428
CONS_SCORE:
0.4943
DSS_SCORE:
0.6368
HELIX:
0.0276
FCONS_SCORE:
1.3127
RIG_SCORE:
0.6362
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1121R
TCGA-24-1104
OV
TCGA
PQSTS
DEG_SPOP_SBC_1
0.1944
p.A1103D
TCGA-A5-A1OF
UCEC
TCGA
PQSTS
DEG_SPOP_SBC_1
0.0833
p.A1103D
DO42568
UCEC
ICGC
PQSTS
DEG_SPOP_SBC_1
0.0833
p.P1108S
TCGA-D9-A1JX
SKCM
TCGA
PQSTS
DEG_SPOP_SBC_1
0.2222
p.P1108S
DO37711
SKCM
ICGC
PQSTS
DEG_SPOP_SBC_1
0.2222
p.G1121W
TCGA-FS-A1Z0
SKCM
TCGA
PQSTS
DEG_SPOP_SBC_1
0.1944
p.A1119V
TCGA-GN-A26C
SKCM
TCGA
PQSTS
DEG_SPOP_SBC_1
0.25
p.D1110Y
DO229027
LICA
ICGC
PQSTS
DEG_SPOP_SBC_1
0.7222
p.S1104I
DO229026
LICA
ICGC
PQSTS
DEG_SPOP_SBC_1
0.1111
p.S1114I
DO229045
LICA
ICGC
PQSTS
DEG_SPOP_SBC_1
0.8453
p.Q1126H
DO43049
UCEC
ICGC
PQSTS
DEG_SPOP_SBC_1
0.0556
p.S1124F
MOG-G-CCM
central_nervous_system
COSMIC
PQSTS
DEG_SPOP_SBC_1
0.2222
p.S1125F
MOG-G-CCM
central_nervous_system
COSMIC
PQSTS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with TCOF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14497
AT-rich interactive domain-containing protein 1A
DEG_SPOP_SBC_1
1147:1151
PQSTS
SPOP
0.9731
More...
P07202
Thyroid peroxidase
DEG_SPOP_SBC_1
245:249
PQSTS
SPOP
0.8902
More...
Q13428
Treacle protein
DEG_SPOP_SBC_1
1112:1116
PQSTS
SPOP
0.9975
More...
Q14114
Low-density lipoprotein receptor-related protein 8
DEG_SPOP_SBC_1
738:742
PQSTS
SPOP
0.7494
More...
Q92817
Envoplakin
DEG_SPOP_SBC_1
1806:1810
PQSTS
SPOP
0.681
More...
Q96EP0
E3 ubiquitin-protein ligase RNF31
DEG_SPOP_SBC_1
279:283
PQSTS
SPOP
0.9473
More...
Q9NU22
Midasin
DEG_SPOP_SBC_1
1546:1550
PQSTS
SPOP
0.568
More...
Q9P2H0
Centrosomal protein of 126 kDa
DEG_SPOP_SBC_1
804:808
PQSTS
SPOP
0.9041
More...
Q9HCK1
DBF4-type zinc finger-containing protein 2
DEG_SPOP_SBC_1
502:506
PQSTS
SPOP
0.9849
More...