DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PQSTS
Uniprot ID:
Q14114
Source protein:
Low-density lipoprotein receptor-related protein 8
Source gene:
LRP8
Class:
DEG_SPOP_SBC_1
Location:
738:742
E3 ligase:
SPOP
DEGRON score:
0.7494
ASA_SCORE:
81.74
COIL:
0.7862
CONS_SCORE:
0.5005
DSS_SCORE:
0.4671
HELIX:
0.0774
FCONS_SCORE:
0.9707
RIG_SCORE:
0.6914
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T749I
TCGA-DF-A2KU
UCEC
TCGA
PQSTS
DEG_SPOP_SBC_1
0.1389
p.T749I
DO223286
UCEC
ICGC
PQSTS
DEG_SPOP_SBC_1
0.1389
p.R736Q
SIDM00672
Hepatocellular Carcinoma
GDSC
PQSTS
DEG_SPOP_SBC_1
0.2778
p.E742D
ACH-000786
Lymphoma
CCLE
PQSTS
DEG_SPOP_SBC_1
0.6758
p.E742D
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PQSTS
DEG_SPOP_SBC_1
0.6758
p.P743L
RO82-W-1
thyroid
COSMIC
PQSTS
DEG_SPOP_SBC_1
0.3056
p.P743L
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PQSTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with LRP8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14497
AT-rich interactive domain-containing protein 1A
DEG_SPOP_SBC_1
1147:1151
PQSTS
SPOP
0.9731
More...
P07202
Thyroid peroxidase
DEG_SPOP_SBC_1
245:249
PQSTS
SPOP
0.8902
More...
Q13428
Treacle protein
DEG_SPOP_SBC_1
1112:1116
PQSTS
SPOP
0.9975
More...
Q14114
Low-density lipoprotein receptor-related protein 8
DEG_SPOP_SBC_1
738:742
PQSTS
SPOP
0.7494
More...
Q92817
Envoplakin
DEG_SPOP_SBC_1
1806:1810
PQSTS
SPOP
0.681
More...
Q96EP0
E3 ubiquitin-protein ligase RNF31
DEG_SPOP_SBC_1
279:283
PQSTS
SPOP
0.9473
More...
Q9NU22
Midasin
DEG_SPOP_SBC_1
1546:1550
PQSTS
SPOP
0.568
More...
Q9P2H0
Centrosomal protein of 126 kDa
DEG_SPOP_SBC_1
804:808
PQSTS
SPOP
0.9041
More...
Q9HCK1
DBF4-type zinc finger-containing protein 2
DEG_SPOP_SBC_1
502:506
PQSTS
SPOP
0.9849
More...