DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PQSTS
Uniprot ID:
Q9HCK1
Source protein:
DBF4-type zinc finger-containing protein 2
Source gene:
ZDBF2
Class:
DEG_SPOP_SBC_1
Location:
502:506
E3 ligase:
SPOP
DEGRON score:
0.9849
ASA_SCORE:
81.96
COIL:
0.9036
CONS_SCORE:
0.7821
DSS_SCORE:
0.6172
HELIX:
0.069
FCONS_SCORE:
1.0847
RIG_SCORE:
0.621
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V513I
TCGA-43-A474
LUSC
TCGA
PQSTS
DEG_SPOP_SBC_1
0.1389
p.V513I
DO45490
LUSC
ICGC
PQSTS
DEG_SPOP_SBC_1
0.1389
p.D499N
TCGA-55-8302
LUAD
TCGA
PQSTS
DEG_SPOP_SBC_1
0.25
p.D499N
DO45312
LUAD
ICGC
PQSTS
DEG_SPOP_SBC_1
0.25
p.E515D
TCGA-BR-8297
STAD
TCGA
PQSTS
DEG_SPOP_SBC_1
0.0833
p.E515D
DO38555
STAD
ICGC
PQSTS
DEG_SPOP_SBC_1
0.0833
p.E515K
TCGA-EE-A2M6
SKCM
TCGA
PQSTS
DEG_SPOP_SBC_1
0.0833
p.E515K
DO222514
MELA
ICGC
PQSTS
DEG_SPOP_SBC_1
0.0833
p.E515K
DO37976
SKCM
ICGC
PQSTS
DEG_SPOP_SBC_1
0.0833
p.E493K
TCGA-FW-A3R5
SKCM
TCGA
PQSTS
DEG_SPOP_SBC_1
0.0833
p.E493K
DO37406
SKCM
ICGC
PQSTS
DEG_SPOP_SBC_1
0.0833
p.T505S
SIDM00492
Glioblastoma
GDSC
PQSTS
DEG_SPOP_SBC_1
0.6005
p.T505S
ACH-000269
Brain Cancer
CCLE
PQSTS
DEG_SPOP_SBC_1
0.6005
p.T505S
AM-38
central_nervous_system
COSMIC
PQSTS
DEG_SPOP_SBC_1
0.6005
p.T503S
AM-38
central_nervous_system
COSMIC
PQSTS
DEG_SPOP_SBC_1
0.7116
Drug responses associated with ZDBF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14497
AT-rich interactive domain-containing protein 1A
DEG_SPOP_SBC_1
1147:1151
PQSTS
SPOP
0.9731
More...
P07202
Thyroid peroxidase
DEG_SPOP_SBC_1
245:249
PQSTS
SPOP
0.8902
More...
Q13428
Treacle protein
DEG_SPOP_SBC_1
1112:1116
PQSTS
SPOP
0.9975
More...
Q14114
Low-density lipoprotein receptor-related protein 8
DEG_SPOP_SBC_1
738:742
PQSTS
SPOP
0.7494
More...
Q92817
Envoplakin
DEG_SPOP_SBC_1
1806:1810
PQSTS
SPOP
0.681
More...
Q96EP0
E3 ubiquitin-protein ligase RNF31
DEG_SPOP_SBC_1
279:283
PQSTS
SPOP
0.9473
More...
Q9NU22
Midasin
DEG_SPOP_SBC_1
1546:1550
PQSTS
SPOP
0.568
More...
Q9P2H0
Centrosomal protein of 126 kDa
DEG_SPOP_SBC_1
804:808
PQSTS
SPOP
0.9041
More...
Q9HCK1
DBF4-type zinc finger-containing protein 2
DEG_SPOP_SBC_1
502:506
PQSTS
SPOP
0.9849
More...