DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATTS
Uniprot ID:
Q14157
Source protein:
Ubiquitin-associated protein 2-like
Source gene:
UBAP2L
Class:
DEG_SPOP_SBC_1
Location:
780:784
E3 ligase:
SPOP
DEGRON score:
0.7169
ASA_SCORE:
82.68
COIL:
0.8994
CONS_SCORE:
0.5065
DSS_SCORE:
0.5752
HELIX:
0.022
FCONS_SCORE:
0.9573
RIG_SCORE:
0.6406
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R777Q
TCGA-BS-A0UV
UCEC
TCGA
VATTS
DEG_SPOP_SBC_1
0.25
p.R777Q
DO42793
UCEC
ICGC
VATTS
DEG_SPOP_SBC_1
0.25
p.S778G
TCGA-DF-A2KN
UCEC
TCGA
VATTS
DEG_SPOP_SBC_1
0.2778
p.S778G
DO223282
UCEC
ICGC
VATTS
DEG_SPOP_SBC_1
0.2778
p.P793L
TCGA-EE-A3AG
SKCM
TCGA
VATTS
DEG_SPOP_SBC_1
0.0833
p.P793L
DO37471
SKCM
ICGC
VATTS
DEG_SPOP_SBC_1
0.0833
p.P793L
CP66-MEL
skin
COSMIC
VATTS
DEG_SPOP_SBC_1
0.0833
p.P792S
TCGA-FS-A1Z3
SKCM
TCGA
VATTS
DEG_SPOP_SBC_1
0.1111
p.P792S
DO37635
SKCM
ICGC
VATTS
DEG_SPOP_SBC_1
0.1111
p.V772F
DO229024
LICA
ICGC
VATTS
DEG_SPOP_SBC_1
0.1111
p.P792A
DO222731
MELA
ICGC
VATTS
DEG_SPOP_SBC_1
0.1111
p.P793H
DO229211
THCA
ICGC
VATTS
DEG_SPOP_SBC_1
0.0833
p.V772L
SIDM00421
T-Cell Non-Hodgkin's Lymphoma
GDSC
VATTS
DEG_SPOP_SBC_1
0.1111
p.V772L
SIDM00090
Ovarian Carcinoma
GDSC
VATTS
DEG_SPOP_SBC_1
0.1111
p.V772L
SUP-M2
haematopoietic_and_lymphoid_tissue
COSMIC
VATTS
DEG_SPOP_SBC_1
0.1111
p.V772L
OVCAR-8
ovary
COSMIC
VATTS
DEG_SPOP_SBC_1
0.1111
p.S779P
SIDM01409
Bladder Carcinoma
GDSC
VATTS
DEG_SPOP_SBC_1
0.3056
p.V783L
OVCAR-8
ovary
COSMIC
VATTS
DEG_SPOP_SBC_1
0.6765
p.V783L
SUP-M2
haematopoietic_and_lymphoid_tissue
COSMIC
VATTS
DEG_SPOP_SBC_1
0.6765
Drug responses associated with UBAP2L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60675
Transcription factor MafK
DEG_SPOP_SBC_1
131:135
VATTS
SPOP
0.7845
More...
Q13608
Peroxisome assembly factor 2
DEG_SPOP_SBC_1
570:574
VATTS
SPOP
0.5702
More...
Q14157
Ubiquitin-associated protein 2-like
DEG_SPOP_SBC_1
780:784
VATTS
SPOP
0.7169
More...
Q14160
Protein scribble homolog
DEG_SPOP_SBC_1
969:973
VATTS
SPOP
0.9963
More...
Q6PI98
INO80 complex subunit C
DEG_SPOP_SBC_1
8:12
VATTS
SPOP
0.9604
More...
Q8IWV7
E3 ubiquitin-protein ligase UBR1
DEG_SPOP_SBC_1
996:1000
VATTS
SPOP
0.5572
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7777:7781
VATTS
SPOP
0.9972
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
345:349
VATTS
SPOP
0.7691
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
1268:1272
VATTS
SPOP
0.9771
More...