DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATTS
Uniprot ID:
Q8IWV7
Source protein:
E3 ubiquitin-protein ligase UBR1
Source gene:
UBR1
Class:
DEG_SPOP_SBC_1
Location:
996:1000
E3 ligase:
SPOP
DEGRON score:
0.5572
ASA_SCORE:
55.84
COIL:
0.366
CONS_SCORE:
0.2878
DSS_SCORE:
0.3548
HELIX:
0.1376
FCONS_SCORE:
0.9045
RIG_SCORE:
0.7646
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T999I
TCGA-19-5956
GBM
TCGA
VATTS
DEG_SPOP_SBC_1
0.7078
p.T999I
DO13863
GBM
ICGC
VATTS
DEG_SPOP_SBC_1
0.7078
p.R987Q
TCGA-W3-AA21
SKCM
TCGA
VATTS
DEG_SPOP_SBC_1
0.0833
p.R987Q
DO51278
SKCM
ICGC
VATTS
DEG_SPOP_SBC_1
0.0833
p.T998I
DO222409
MELA
ICGC
VATTS
DEG_SPOP_SBC_1
0.7078
p.G1001V
DO222875
MELA
ICGC
VATTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with UBR1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60675
Transcription factor MafK
DEG_SPOP_SBC_1
131:135
VATTS
SPOP
0.7845
More...
Q13608
Peroxisome assembly factor 2
DEG_SPOP_SBC_1
570:574
VATTS
SPOP
0.5702
More...
Q14157
Ubiquitin-associated protein 2-like
DEG_SPOP_SBC_1
780:784
VATTS
SPOP
0.7169
More...
Q14160
Protein scribble homolog
DEG_SPOP_SBC_1
969:973
VATTS
SPOP
0.9963
More...
Q6PI98
INO80 complex subunit C
DEG_SPOP_SBC_1
8:12
VATTS
SPOP
0.9604
More...
Q8IWV7
E3 ubiquitin-protein ligase UBR1
DEG_SPOP_SBC_1
996:1000
VATTS
SPOP
0.5572
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7777:7781
VATTS
SPOP
0.9972
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
345:349
VATTS
SPOP
0.7691
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
1268:1272
VATTS
SPOP
0.9771
More...