DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATTS
Uniprot ID:
Q6PI98
Source protein:
INO80 complex subunit C
Source gene:
INO80C
Class:
DEG_SPOP_SBC_1
Location:
8:12
E3 ligase:
SPOP
DEGRON score:
0.9604
ASA_SCORE:
70.98
COIL:
0.6858
CONS_SCORE:
0.3385
DSS_SCORE:
0.5651
HELIX:
0.019
FCONS_SCORE:
0.9369
RIG_SCORE:
0.7601
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I7F
TCGA-D1-A0ZO
UCEC
TCGA
VATTS
DEG_SPOP_SBC_1
0.3056
p.I7F
DO41927
UCEC
ICGC
VATTS
DEG_SPOP_SBC_1
0.3056
p.I7V
TCGA-VR-A8EU
ESCA
TCGA
VATTS
DEG_SPOP_SBC_1
0.3056
p.E6D
DO10880
GBM
ICGC
VATTS
DEG_SPOP_SBC_1
0.2778
p.S20R
DO228908
LICA
ICGC
VATTS
DEG_SPOP_SBC_1
0.5556
p.A2E
DO229045
LICA
ICGC
VATTS
DEG_SPOP_SBC_1
0.6111
p.T11S
DO35609
PBCA
ICGC
VATTS
DEG_SPOP_SBC_1
0.6005
p.V17L
SIDM00547
Non-Small Cell Lung Carcinoma
GDSC
VATTS
DEG_SPOP_SBC_1
0.1944
p.V17L
ACH-000438
Lung Cancer
CCLE
VATTS
DEG_SPOP_SBC_1
0.1944
p.V17L
LU-65
lung
COSMIC
VATTS
DEG_SPOP_SBC_1
0.1944
p.A2V
SIDM00217
Colorectal Carcinoma
GDSC
VATTS
DEG_SPOP_SBC_1
0.6111
p.A2V
ACH-000999
Colon/Colorectal Cancer
CCLE
VATTS
DEG_SPOP_SBC_1
0.6111
p.A2V
SNU-1040
large_intestine
COSMIC
VATTS
DEG_SPOP_SBC_1
0.6111
p.A22V
ACH-000013
Ovarian Cancer
CCLE
VATTS
DEG_SPOP_SBC_1
0.5
p.T10I
ACH-000628
Lung Cancer
CCLE
VATTS
DEG_SPOP_SBC_1
0.7078
p.V10A
ACH-000996
Endometrial/Uterine Cancer
CCLE
VATTS
DEG_SPOP_SBC_1
0.6936
Drug responses associated with INO80C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60675
Transcription factor MafK
DEG_SPOP_SBC_1
131:135
VATTS
SPOP
0.7845
More...
Q13608
Peroxisome assembly factor 2
DEG_SPOP_SBC_1
570:574
VATTS
SPOP
0.5702
More...
Q14157
Ubiquitin-associated protein 2-like
DEG_SPOP_SBC_1
780:784
VATTS
SPOP
0.7169
More...
Q14160
Protein scribble homolog
DEG_SPOP_SBC_1
969:973
VATTS
SPOP
0.9963
More...
Q6PI98
INO80 complex subunit C
DEG_SPOP_SBC_1
8:12
VATTS
SPOP
0.9604
More...
Q8IWV7
E3 ubiquitin-protein ligase UBR1
DEG_SPOP_SBC_1
996:1000
VATTS
SPOP
0.5572
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7777:7781
VATTS
SPOP
0.9972
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
345:349
VATTS
SPOP
0.7691
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
1268:1272
VATTS
SPOP
0.9771
More...