DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATTS
Uniprot ID:
Q9Y6J0
Source protein:
Calcineurin-binding protein cabin-1
Source gene:
CABIN1
Class:
DEG_SPOP_SBC_1
Location:
345:349
E3 ligase:
SPOP
DEGRON score:
0.7691
ASA_SCORE:
80.5
COIL:
0.8802
CONS_SCORE:
0.3044
DSS_SCORE:
0.2713
HELIX:
0.072
FCONS_SCORE:
0.9753
RIG_SCORE:
0.7751
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A336T
TCGA-DU-6392
LGG
TCGA
VATTS
DEG_SPOP_SBC_1
0.0833
p.A336T
DO22237
LGG
ICGC
VATTS
DEG_SPOP_SBC_1
0.0833
p.A336T
DO232224
PBCA
ICGC
VATTS
DEG_SPOP_SBC_1
0.0833
p.A336T
SIDM01278
Colorectal Carcinoma
GDSC
VATTS
DEG_SPOP_SBC_1
0.0833
p.A336T
SIDM01154
T-Lymphoblastic Leukemia
GDSC
VATTS
DEG_SPOP_SBC_1
0.0833
p.A336T
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
VATTS
DEG_SPOP_SBC_1
0.0833
p.V335G
DO48365
BLCA
ICGC
VATTS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with CABIN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60675
Transcription factor MafK
DEG_SPOP_SBC_1
131:135
VATTS
SPOP
0.7845
More...
Q13608
Peroxisome assembly factor 2
DEG_SPOP_SBC_1
570:574
VATTS
SPOP
0.5702
More...
Q14157
Ubiquitin-associated protein 2-like
DEG_SPOP_SBC_1
780:784
VATTS
SPOP
0.7169
More...
Q14160
Protein scribble homolog
DEG_SPOP_SBC_1
969:973
VATTS
SPOP
0.9963
More...
Q6PI98
INO80 complex subunit C
DEG_SPOP_SBC_1
8:12
VATTS
SPOP
0.9604
More...
Q8IWV7
E3 ubiquitin-protein ligase UBR1
DEG_SPOP_SBC_1
996:1000
VATTS
SPOP
0.5572
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7777:7781
VATTS
SPOP
0.9972
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
345:349
VATTS
SPOP
0.7691
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SPOP_SBC_1
1268:1272
VATTS
SPOP
0.9771
More...