DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPTTS
Uniprot ID:
Q96AG3
Source protein:
Mitochondrial outer membrane protein SLC25A46
Source gene:
SLC25A46
Class:
DEG_SPOP_SBC_1
Location:
66:70
E3 ligase:
SPOP
DEGRON score:
0.9982
ASA_SCORE:
86.26
COIL:
0.9586
CONS_SCORE:
0.3357
DSS_SCORE:
0.6897
HELIX:
0.0106
FCONS_SCORE:
1.1401
RIG_SCORE:
0.6299
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H56Y
DO233748
GACA
ICGC
VPTTS
DEG_SPOP_SBC_1
0.0556
p.A73T
DO22237
LGG
ICGC
VPTTS
DEG_SPOP_SBC_1
0.25
p.V65L
DO229028
LICA
ICGC
VPTTS
DEG_SPOP_SBC_1
0.3056
p.Y64C
DO230929
LUSC
ICGC
VPTTS
DEG_SPOP_SBC_1
0.7222
p.Y64C
DO224572
LUSC
ICGC
VPTTS
DEG_SPOP_SBC_1
0.7222
p.S72L
DO52363
LUSC
ICGC
VPTTS
DEG_SPOP_SBC_1
0.2778
p.P67R
DO227531
PACA
ICGC
VPTTS
DEG_SPOP_SBC_1
0.6401
p.L75Q
DO37951
SKCM
ICGC
VPTTS
DEG_SPOP_SBC_1
0.1944
p.A67P
DO42023
UCEC
ICGC
VPTTS
DEG_SPOP_SBC_1
0.7503
p.A73S
DO52402
UCEC
ICGC
VPTTS
DEG_SPOP_SBC_1
0.25
p.P76A
SIDM00239
Kidney Carcinoma
GDSC
VPTTS
DEG_SPOP_SBC_1
0.1667
p.P76A
ACH-000159
Kidney Cancer
CCLE
VPTTS
DEG_SPOP_SBC_1
0.1667
p.G75S
SIDM00711
Squamous Cell Lung Carcinoma
GDSC
VPTTS
DEG_SPOP_SBC_1
0.1944
p.G75S
ACH-000727
Lung Cancer
CCLE
VPTTS
DEG_SPOP_SBC_1
0.1944
p.W57G
ACH-000997
Colon/Colorectal Cancer
CCLE
VPTTS
DEG_SPOP_SBC_1
0.0833
p.W57G
ACH-001061
Colon/Colorectal Cancer
CCLE
VPTTS
DEG_SPOP_SBC_1
0.0833
p.V79L
KM-H2
haematopoietic_and_lymphoid_tissue
COSMIC
VPTTS
DEG_SPOP_SBC_1
0.0833
p.V63L
KM-H2
haematopoietic_and_lymphoid_tissue
COSMIC
VPTTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with SLC25A46 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43314
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2
DEG_SPOP_SBC_1
370:374
VPTTS
SPOP
0.8558
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2399:2403
VPTTS
SPOP
0.8982
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2495:2499
VPTTS
SPOP
0.7928
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2575:2579
VPTTS
SPOP
0.5198
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2671:2675
VPTTS
SPOP
0.9448
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2839:2843
VPTTS
SPOP
0.9083
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2935:2939
VPTTS
SPOP
0.9476
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2951:2955
VPTTS
SPOP
0.798
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2959:2963
VPTTS
SPOP
0.6777
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3071:3075
VPTTS
SPOP
0.6444
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3159:3163
VPTTS
SPOP
0.5848
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3191:3195
VPTTS
SPOP
0.7503
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3922:3926
VPTTS
SPOP
0.7805
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4228:4232
VPTTS
SPOP
0.9669
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4300:4304
VPTTS
SPOP
0.9127
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4324:4328
VPTTS
SPOP
0.7065
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4444:4448
VPTTS
SPOP
0.8216
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4516:4520
VPTTS
SPOP
0.9642
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4596:4600
VPTTS
SPOP
0.5935
More...
Q05707
Collagen alpha-1
DEG_SPOP_SBC_1
725:729
VPTTS
SPOP
0.9814
More...
Q14004
Cyclin-dependent kinase 13
DEG_SPOP_SBC_1
1284:1288
VPTTS
SPOP
0.9896
More...
Q6PFW1
Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1
DEG_SPOP_SBC_1
381:385
VPTTS
SPOP
0.942
More...
Q6ZNA4
E3 ubiquitin-protein ligase Arkadia
DEG_SPOP_SBC_1
395:399
VPTTS
SPOP
0.9894
More...
Q8N5I2
Arrestin domain-containing protein 1
DEG_SPOP_SBC_1
393:397
VPTTS
SPOP
0.995
More...
Q8TDF5
Neuropilin and tolloid-like protein 1
DEG_SPOP_SBC_1
498:502
VPTTS
SPOP
0.9808
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
13290:13294
VPTTS
SPOP
0.9863
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
13602:13606
VPTTS
SPOP
0.9442
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
13913:13917
VPTTS
SPOP
0.8716
More...
Q96AG3
Mitochondrial outer membrane protein SLC25A46
DEG_SPOP_SBC_1
66:70
VPTTS
SPOP
0.9982
More...
Q96T58
Msx2-interacting protein
DEG_SPOP_SBC_1
3459:3463
VPTTS
SPOP
0.9438
More...
Q9HBW1
Leucine-rich repeat-containing protein 4
DEG_SPOP_SBC_1
476:480
VPTTS
SPOP
0.9425
More...
Q9NV92
NEDD4 family-interacting protein 2
DEG_SPOP_SBC_1
158:162
VPTTS
SPOP
0.9979
More...
Q9UGU0
Transcription factor 20
DEG_SPOP_SBC_1
1828:1832
VPTTS
SPOP
0.5647
More...
Q9NU02
Ankyrin repeat and EF-hand domain-containing protein 1
DEG_SPOP_SBC_1
687:691
VPTTS
SPOP
0.9845
More...
Q9P1Y6
PHD and RING finger domain-containing protein 1
DEG_SPOP_SBC_1
257:261
VPTTS
SPOP
0.9684
More...