DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSTTT
Uniprot ID:
O43491
Source protein:
Band 4.1-like protein 2
Source gene:
EPB41L2
Class:
DEG_SPOP_SBC_1
Location:
933:937
E3 ligase:
SPOP
DEGRON score:
0.8993
ASA_SCORE:
80.16
COIL:
0.5948
CONS_SCORE:
0.5343
DSS_SCORE:
0.4507
HELIX:
0.0198
FCONS_SCORE:
0.9596
RIG_SCORE:
0.7287
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S932F
TCGA-FW-A3R5
SKCM
TCGA
VSTTT
DEG_SPOP_SBC_1
0.3056
p.S932F
TCGA-GN-A4U3
SKCM
TCGA
VSTTT
DEG_SPOP_SBC_1
0.3056
p.V933A
SIDM00845
Burkitt's Lymphoma
GDSC
VSTTT
DEG_SPOP_SBC_1
0.5825
p.V933A
SIDM00461
Acute Myeloid Leukemia
GDSC
VSTTT
DEG_SPOP_SBC_1
0.5825
p.V933A
SIDM01519
Head and Neck Carcinoma
GDSC
VSTTT
DEG_SPOP_SBC_1
0.5825
p.T938N
SIDM00708
Non-Small Cell Lung Carcinoma
GDSC
VSTTT
DEG_SPOP_SBC_1
0.3056
p.T938N
NCI-H2087
lung
COSMIC
VSTTT
DEG_SPOP_SBC_1
0.3056
p.E931D
ACH-002205
Skin Cancer
CCLE
VSTTT
DEG_SPOP_SBC_1
0.2778
p.E931D
WM1552C
skin
COSMIC
VSTTT
DEG_SPOP_SBC_1
0.2778
Drug responses associated with EPB41L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
825:829
VSTTT
SPOP
0.8472
More...
O43491
Band 4.1-like protein 2
DEG_SPOP_SBC_1
933:937
VSTTT
SPOP
0.8993
More...
O60216
Double-strand-break repair protein rad21 homolog
DEG_SPOP_SBC_1
184:188
VSTTT
SPOP
0.9908
More...
Q8N0W4
Neuroligin-4, X-linked
DEG_SPOP_SBC_1
607:611
VSTTT
SPOP
0.9168
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SPOP_SBC_1
12:16
VSTTT
SPOP
0.9828
More...
Q8NFZ3
Neuroligin-4, Y-linked
DEG_SPOP_SBC_1
607:611
VSTTT
SPOP
0.9392
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
184:188
VSTTT
SPOP
0.9692
More...
Q96E09
PPP2R1A-PPP2R2A-interacting phosphatase regulator 1
DEG_SPOP_SBC_1
261:265
VSTTT
SPOP
0.995
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
848:852
VSTTT
SPOP
0.8971
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
1492:1496
VSTTT
SPOP
0.9684
More...
Q9NSB2
Keratin, type II cuticular Hb4
DEG_SPOP_SBC_1
590:594
VSTTT
SPOP
0.6411
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
432:436
VSTTT
SPOP
0.8963
More...