DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VSTTT
Uniprot ID:
Q9NSB2
Source protein:
Keratin, type II cuticular Hb4
Source gene:
KRT84
Class:
DEG_SPOP_SBC_1
Location:
590:594
E3 ligase:
SPOP
DEGRON score:
0.6411
ASA_SCORE:
67.64
COIL:
0.6354
CONS_SCORE:
0.787
DSS_SCORE:
0.4392
HELIX:
0.0104
FCONS_SCORE:
0.973
RIG_SCORE:
0.77
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R588C
TCGA-19-1790
GBM
TCGA
VSTTT
DEG_SPOP_SBC_1
0.2778
p.R588C
DO12328
GBM
ICGC
VSTTT
DEG_SPOP_SBC_1
0.2778
p.R588C
ACH-002360
Non-Cancerous
CCLE
VSTTT
DEG_SPOP_SBC_1
0.2778
p.F589L
TCGA-CJ-4638
KIRC
TCGA
VSTTT
DEG_SPOP_SBC_1
0.3056
p.F589L
DO20022
KIRC
ICGC
VSTTT
DEG_SPOP_SBC_1
0.3056
p.R583C
TCGA-DM-A28H
COAD
TCGA
VSTTT
DEG_SPOP_SBC_1
0.1389
p.R583C
DO8906
COAD
ICGC
VSTTT
DEG_SPOP_SBC_1
0.1389
p.G582S
TCGA-DX-A8BJ
SARC
TCGA
VSTTT
DEG_SPOP_SBC_1
0.1111
p.G582S
DO222946
BTCA
ICGC
VSTTT
DEG_SPOP_SBC_1
0.1111
p.G582S
DO220045
SARC
ICGC
VSTTT
DEG_SPOP_SBC_1
0.1111
p.R583H
TCGA-EI-6507
READ
TCGA
VSTTT
DEG_SPOP_SBC_1
0.1389
p.R583H
DO36675
READ
ICGC
VSTTT
DEG_SPOP_SBC_1
0.1389
p.R583H
ACH-000940
Endometrial/Uterine Cancer
CCLE
VSTTT
DEG_SPOP_SBC_1
0.1389
Drug responses associated with KRT84 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SPOP_SBC_1
825:829
VSTTT
SPOP
0.8472
More...
O43491
Band 4.1-like protein 2
DEG_SPOP_SBC_1
933:937
VSTTT
SPOP
0.8993
More...
O60216
Double-strand-break repair protein rad21 homolog
DEG_SPOP_SBC_1
184:188
VSTTT
SPOP
0.9908
More...
Q8N0W4
Neuroligin-4, X-linked
DEG_SPOP_SBC_1
607:611
VSTTT
SPOP
0.9168
More...
Q8NDX5
Polyhomeotic-like protein 3
DEG_SPOP_SBC_1
12:16
VSTTT
SPOP
0.9828
More...
Q8NFZ3
Neuroligin-4, Y-linked
DEG_SPOP_SBC_1
607:611
VSTTT
SPOP
0.9392
More...
Q96D42
Hepatitis A virus cellular receptor 1
DEG_SPOP_SBC_1
184:188
VSTTT
SPOP
0.9692
More...
Q96E09
PPP2R1A-PPP2R2A-interacting phosphatase regulator 1
DEG_SPOP_SBC_1
261:265
VSTTT
SPOP
0.995
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
848:852
VSTTT
SPOP
0.8971
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
1492:1496
VSTTT
SPOP
0.9684
More...
Q9NSB2
Keratin, type II cuticular Hb4
DEG_SPOP_SBC_1
590:594
VSTTT
SPOP
0.6411
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
432:436
VSTTT
SPOP
0.8963
More...