DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VTTTT
Uniprot ID:
Q12830
Source protein:
Nucleosome-remodeling factor subunit BPTF
Source gene:
BPTF
Class:
DEG_SPOP_SBC_1
Location:
1751:1755
E3 ligase:
SPOP
DEGRON score:
0.9422
ASA_SCORE:
95.7
COIL:
0.7256
CONS_SCORE:
0.3426
DSS_SCORE:
0.3608
HELIX:
0.0134
FCONS_SCORE:
1.0637
RIG_SCORE:
0.8034
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I1765V
TCGA-AP-A1DK
UCEC
TCGA
VTTTT
DEG_SPOP_SBC_1
0.0556
p.P1759S
TCGA-FW-A3R5
SKCM
TCGA
VTTTT
DEG_SPOP_SBC_1
0.2222
p.P1759L
TCGA-FW-A3R5
SKCM
TCGA
VTTTT
DEG_SPOP_SBC_1
0.2222
p.F1750C
DO23174
LINC
ICGC
VTTTT
DEG_SPOP_SBC_1
0.3056
p.G1751D
DO23362
LINC
ICGC
VTTTT
DEG_SPOP_SBC_1
0.7198
p.W1754C
DO24028
LUAD
ICGC
VTTTT
DEG_SPOP_SBC_1
0.7
p.R1747T
DO231127
LUSC
ICGC
VTTTT
DEG_SPOP_SBC_1
0.2222
p.P1748L
DO222721
MELA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.3611
p.P1746L
DO37406
SKCM
ICGC
VTTTT
DEG_SPOP_SBC_1
0.1944
p.P1746S
DO37406
SKCM
ICGC
VTTTT
DEG_SPOP_SBC_1
0.1944
p.I1752V
DO42033
UCEC
ICGC
VTTTT
DEG_SPOP_SBC_1
0.7076
p.T1762S
SIDM00158
Glioblastoma
GDSC
VTTTT
DEG_SPOP_SBC_1
0.5833
p.T1762S
ACH-000623
Brain Cancer
CCLE
VTTTT
DEG_SPOP_SBC_1
0.5833
Drug responses associated with BPTF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14490
Disks large-associated protein 1
DEG_SPOP_SBC_1
625:629
VTTTT
SPOP
0.9294
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
388:392
VTTTT
SPOP
0.8483
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
763:767
VTTTT
SPOP
0.7448
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1516:1520
VTTTT
SPOP
0.7066
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1893:1897
VTTTT
SPOP
0.6112
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
1751:1755
VTTTT
SPOP
0.9422
More...
Q12955
Ankyrin-3
DEG_SPOP_SBC_1
3959:3963
VTTTT
SPOP
0.9114
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
6984:6988
VTTTT
SPOP
0.9363
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7102:7106
VTTTT
SPOP
0.7934
More...
Q8TCZ2
CD99 antigen-like protein 2
DEG_SPOP_SBC_1
98:102
VTTTT
SPOP
0.9976
More...
Q9P265
Disco-interacting protein 2 homolog B
DEG_SPOP_SBC_1
222:226
VTTTT
SPOP
0.9648
More...