DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VTTTT
Uniprot ID:
Q8TCZ2
Source protein:
CD99 antigen-like protein 2
Source gene:
CD99L2
Class:
DEG_SPOP_SBC_1
Location:
98:102
E3 ligase:
SPOP
DEGRON score:
0.9976
ASA_SCORE:
86.88
COIL:
0.9122
CONS_SCORE:
0.4422
DSS_SCORE:
0.616
HELIX:
0.0266
FCONS_SCORE:
1.1822
RIG_SCORE:
0.7529
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H97N
TCGA-56-8625
LUSC
TCGA
VTTTT
DEG_SPOP_SBC_1
0.3056
p.H97N
DO229038
LICA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.3056
p.H97N
DO45515
LUSC
ICGC
VTTTT
DEG_SPOP_SBC_1
0.3056
p.P111A
TCGA-91-6829
LUAD
TCGA
VTTTT
DEG_SPOP_SBC_1
0.0833
p.P111A
DO23564
LUAD
ICGC
VTTTT
DEG_SPOP_SBC_1
0.0833
p.T101M
TCGA-AD-6895
COAD
TCGA
VTTTT
DEG_SPOP_SBC_1
0.7423
p.T101M
DO8938
COAD
ICGC
VTTTT
DEG_SPOP_SBC_1
0.7423
p.T107N
TCGA-C4-A0EZ
BLCA
TCGA
VTTTT
DEG_SPOP_SBC_1
0.1944
p.T107N
DO476
BLCA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.1944
p.K103N
TCGA-CK-5913
COAD
TCGA
VTTTT
DEG_SPOP_SBC_1
0.3056
p.K103N
DO8826
COAD
ICGC
VTTTT
DEG_SPOP_SBC_1
0.3056
p.T99I
TCGA-EB-A24D
SKCM
TCGA
VTTTT
DEG_SPOP_SBC_1
0.5966
p.T99I
DO37440
SKCM
ICGC
VTTTT
DEG_SPOP_SBC_1
0.5966
p.S112F
DO217962
BRCA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.0556
p.G90V
DO225215
BRCA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.1111
p.G90V
DO227836
BRCA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.1111
p.Y98H
DO233784
GACA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.7229
p.S99C
DO233852
GACA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.7541
p.G99V
DO22237
LGG
ICGC
VTTTT
DEG_SPOP_SBC_1
0.7532
p.T100N
DO229032
LICA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.7055
p.G105V
DO23717
LUAD
ICGC
VTTTT
DEG_SPOP_SBC_1
0.25
p.R97P
DO23586
LUAD
ICGC
VTTTT
DEG_SPOP_SBC_1
0.3056
p.D103N
DO37412
SKCM
ICGC
VTTTT
DEG_SPOP_SBC_1
0.3056
p.V109M
DO51761
STAD
ICGC
VTTTT
DEG_SPOP_SBC_1
0.1389
p.D103G
DO222356
STAD
ICGC
VTTTT
DEG_SPOP_SBC_1
0.3056
p.K91N
DO39720
THCA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.1389
p.T112A
SIDM01247
Burkitt's Lymphoma
GDSC
VTTTT
DEG_SPOP_SBC_1
0.0556
p.G94R
SIDM00391
Plasma Cell Myeloma
GDSC
VTTTT
DEG_SPOP_SBC_1
0.2222
p.G94R
SK-MM-2
haematopoietic_and_lymphoid_tissue
COSMIC
VTTTT
DEG_SPOP_SBC_1
0.2222
p.G90R
ACH-000363
Myeloma
CCLE
VTTTT
DEG_SPOP_SBC_1
0.1111
p.G90R
SK-MM-2
haematopoietic_and_lymphoid_tissue
COSMIC
VTTTT
DEG_SPOP_SBC_1
0.1111
p.I104K
ACH-000394
Lung Cancer
CCLE
VTTTT
DEG_SPOP_SBC_1
0.2778
p.I104K
NCI-H2081
lung
COSMIC
VTTTT
DEG_SPOP_SBC_1
0.2778
p.I90T
ACH-000831
Endometrial/Uterine Cancer
CCLE
VTTTT
DEG_SPOP_SBC_1
0.1111
p.I90T
ACH-002201
Cervical Cancer
CCLE
VTTTT
DEG_SPOP_SBC_1
0.1111
p.I90T
TC-YIK
cervix
COSMIC
VTTTT
DEG_SPOP_SBC_1
0.1111
p.G106W
ACH-000833
Sarcoma
CCLE
VTTTT
DEG_SPOP_SBC_1
0.2222
p.G106W
SJRH30
soft_tissue
COSMIC
VTTTT
DEG_SPOP_SBC_1
0.2222
Drug responses associated with CD99L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14490
Disks large-associated protein 1
DEG_SPOP_SBC_1
625:629
VTTTT
SPOP
0.9294
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
388:392
VTTTT
SPOP
0.8483
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
763:767
VTTTT
SPOP
0.7448
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1516:1520
VTTTT
SPOP
0.7066
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1893:1897
VTTTT
SPOP
0.6112
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
1751:1755
VTTTT
SPOP
0.9422
More...
Q12955
Ankyrin-3
DEG_SPOP_SBC_1
3959:3963
VTTTT
SPOP
0.9114
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
6984:6988
VTTTT
SPOP
0.9363
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7102:7106
VTTTT
SPOP
0.7934
More...
Q8TCZ2
CD99 antigen-like protein 2
DEG_SPOP_SBC_1
98:102
VTTTT
SPOP
0.9976
More...
Q9P265
Disco-interacting protein 2 homolog B
DEG_SPOP_SBC_1
222:226
VTTTT
SPOP
0.9648
More...