DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VTTTT
Uniprot ID:
Q9P265
Source protein:
Disco-interacting protein 2 homolog B
Source gene:
DIP2B
Class:
DEG_SPOP_SBC_1
Location:
222:226
E3 ligase:
SPOP
DEGRON score:
0.9648
ASA_SCORE:
68.18
COIL:
0.8598
CONS_SCORE:
0.0795
DSS_SCORE:
0.5746
HELIX:
0.0784
FCONS_SCORE:
0.938
RIG_SCORE:
0.6859
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S232Y
TCGA-AA-A010
COAD
TCGA
VTTTT
DEG_SPOP_SBC_1
0.1667
p.R212Q
TCGA-AG-A002
READ
TCGA
VTTTT
DEG_SPOP_SBC_1
0.0556
p.R212Q
TCGA-D3-A8GM
SKCM
TCGA
VTTTT
DEG_SPOP_SBC_1
0.0556
p.R212Q
DO50288
SKCM
ICGC
VTTTT
DEG_SPOP_SBC_1
0.0556
p.E214D
TCGA-AP-A1E0
UCEC
TCGA
VTTTT
DEG_SPOP_SBC_1
0.1111
p.E214D
DO43154
UCEC
ICGC
VTTTT
DEG_SPOP_SBC_1
0.1111
p.R236C
TCGA-D1-A1NY
UCEC
TCGA
VTTTT
DEG_SPOP_SBC_1
0.0556
p.R236C
DO42512
UCEC
ICGC
VTTTT
DEG_SPOP_SBC_1
0.0556
p.S217C
TCGA-DF-A2KR
UCEC
TCGA
VTTTT
DEG_SPOP_SBC_1
0.1944
p.S217C
DO223284
UCEC
ICGC
VTTTT
DEG_SPOP_SBC_1
0.1944
p.T226I
DO225346
BRCA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.7078
p.S228F
DO222536
MELA
ICGC
VTTTT
DEG_SPOP_SBC_1
0.2778
Drug responses associated with DIP2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14490
Disks large-associated protein 1
DEG_SPOP_SBC_1
625:629
VTTTT
SPOP
0.9294
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
388:392
VTTTT
SPOP
0.8483
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
763:767
VTTTT
SPOP
0.7448
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1516:1520
VTTTT
SPOP
0.7066
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1893:1897
VTTTT
SPOP
0.6112
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
1751:1755
VTTTT
SPOP
0.9422
More...
Q12955
Ankyrin-3
DEG_SPOP_SBC_1
3959:3963
VTTTT
SPOP
0.9114
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
6984:6988
VTTTT
SPOP
0.9363
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
7102:7106
VTTTT
SPOP
0.7934
More...
Q8TCZ2
CD99 antigen-like protein 2
DEG_SPOP_SBC_1
98:102
VTTTT
SPOP
0.9976
More...
Q9P265
Disco-interacting protein 2 homolog B
DEG_SPOP_SBC_1
222:226
VTTTT
SPOP
0.9648
More...