Search results: The pahtway p2790 has 66 genes in the original annotation. Currently, there are 47 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
153ADRB1ADRB1R | B1AR | BETA1AR | RHRadrenoceptor beta 110q25.3ADT:Sun_2012
CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
10313RTN3ASYIP | HAP | NSPL2 | NSPLII | RTN3-A1reticulon 311q13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
144402CPNE8-copine 812q12CV:PGCnp
DMG:Nishioka_2013
Expression
83729INHBE-inhibin beta E12q13.3CV:PGCnp
PMID:cooccur
160428ALDH1L2mtFDHaldehyde dehydrogenase 1 family member L212q23.3CV:PGCnp
DNM:Fromer_2014		CompositeSet
64881PCDH20PCDH13protocadherin 2013q21CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
64067NPAS3MOP6 | PASD6 | bHLHe12neuronal PAS domain protein 314q13.1Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
22795NID2NID-2nidogen 214q22.1CV:PGCnp
DMG:Wockner_2014
51676ASB2ASB-2ankyrin repeat and SOCS box containing 214q32.12CV:PGCnp
122509IFI27L1FAM14B | ISG12Cinterferon, alpha-inducible protein 27-like 114q32.12CV:PGCnp
DMG:Jaffe_2016
7453WARSGAMMA-2 | IFI53 | IFP53tryptophanyl-tRNA synthetase14q32.31DNM:Fromer_2014
PMID:cooccur		CompositeSet
53346TM6SF1-transmembrane 6 superfamily member 115q24-q26CV:PGCnp
11151CORO1ACLABP | CLIPINA | HCORO1 | IMD8 | TACO | p57coronin 1A16p11.2CNV:YES
CV:PGCnp
GSMA_IIE		STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Potential synaptic genes
3683ITGALCD11A | LFA-1 | LFA1Aintegrin subunit alpha L16p11.2CV:PGCnp
GO_Annotation
GSMA_IIE
84706GPT2ALT2 | GPT 2 | MRT49glutamic pyruvate transaminase (alanine aminotransferase) 216q12.1CV:PGCnp
GO_Annotation
GSMA_IIE		Ascano FMRP targets
8140SLC7A54F2LC | CD98 | D16S469E | E16 | LAT1 | MPE16 | hLAT1solute carrier family 7 member 516q24.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation		CELL METABOLISM
125058TBC1D16-TBC1 domain family member 1617q25.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014		Ascano FMRP targets
11031RAB31Rab22BRAB31, member RAS oncogene family18p11.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
Expression		INTRACELLULAR TRAFFICKING
1630DCCCRC18 | CRCR1 | IGDCC1 | MRMV1 | NTN1R1DCC netrin 1 receptor18q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
1054CEBPGGPE1BP | IG/EBP-1CCAAT/enhancer binding protein gamma19q13.11CV:PGCnp
22809ATF5ATFX | HMFN0395activating transcription factor 519q13.3CV:PGCnp
PMID:cooccur
26227PHGDH3-PGDH | 3PGDH | HEL-S-113 | NLS | NLS1 | PDG | PGAD | PGD | PGDH | PHGDHD | SERAphosphoglycerate dehydrogenase1p12CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur		CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
83667SESN2HI95 | SES2 | SEST2sestrin 21p35.3CV:PGCnp
DMG:Wockner_2014
116496FAM129AC1orf24 | GIG39 | NIBANfamily with sequence similarity 129 member A1q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014		Ascano FMRP targets
23046KIF21B-kinesin family member 21B1q32.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014		CompositeSet
Darnell FMRP targets
57761TRIB3C20orf97 | NIPK | SINK | SKIP3 | TRB3tribbles pseudokinase 320p13-p12.2CV:PGCnp
Network
PMID:cooccur
10797MTHFD2NMDMCmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase2p13.1CV:PGCnp
56660KCNK12K2p12.1 | THIK-2 | THIK2potassium two pore domain channel subfamily K member 122p16.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
2591GALNT3GalNAc-T3 | HFTC | HHSpolypeptide N-acetylgalactosaminyltransferase 32q24-q31CV:PGCnp
GSMA_IIA
5947RBP1CRABP-I | CRBP | CRBP1 | CRBPI | RBPCretinol binding protein 13q23Association
PMID:cooccur
80854SETD7KMT7 | SET7 | SET7/9 | SET9SET domain containing lysine methyltransferase 74q28CV:PGCnpChromatin Remodeling Genes
23657SLC7A11CCBR1 | xCTsolute carrier family 7 member 114q28.3CV:GWASdb
CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
PMID:cooccur
54510PCDH18PCDH68Lprotocadherin 184q31CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
4131MAP1BFUTSCH | MAP5 | PPP1R102microtubule associated protein 1B5q13CV:PGCnp
GO_Annotation
PMID:cooccur		STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
29958DMGDHDMGDHD | ME2GLYDHdimethylglycine dehydrogenase5q14.1CV:PGCnp
340061TMEM173ERIS | MITA | MPYS | NET23 | SAVI | STING | hMITA | hSTINGtransmembrane protein 1735q31.2CV:PGCnp
DMG:Montano_2016
GSMA_I
8614STC2STC-2 | STCRPstanniocalcin 25q35.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
7162TPBG5T4 | 5T4AG | M6P1 | WAIF1trophoblast glycoprotein6q14-q15CV:PGCnp
DMG:Wockner_2014
81491GPR63PSP24(beta) | PSP24BG protein-coupled receptor 636q16.1-q16.3CV:PGCnp
440ASNSASNSD | TS11asparagine synthetase (glutamine-hydrolyzing)7q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
1978EIF4EBP14E-BP1 | 4EBP1 | BP-1 | PHAS-Ieukaryotic translation initiation factor 4E binding protein 18p12CV:PGCnp
DMG:Jaffe_2016
Network
6503SLASLA1 | SLAPSrc-like-adaptor8q24CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7436VLDLRCAMRQ1 | CARMQ1 | CHRMQ1 | VLDLRCHvery low density lipoprotein receptor9p24CV:PGCnp
GO_Annotation
Network
PMID:cooccur		Ascano FMRP targets
9314KLF4EZF | GKLFKruppel-like factor 4 (gut)9q31CV:PGCnp
PMID:cooccur		Ascano FMRP targets
2040STOMBND7 | EPB7 | EPB72stomatin9q34.1CV:GWAScat
CV:GWASdb
CV:PGCnp		G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
56062KLHL4DKELCHL | KHL4kelch like family member 4Xq21.3CV:PGCnp
9363RAB33ARabS10RAB33A, member RAS oncogene familyXq26.1CV:PGCnpINTRACELLULAR TRAFFICKING
Potential synaptic genes